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New ASPH H update algorithm #302

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New ASPH H update algorithm #302

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Commits on Feb 27, 2024

  1. Generalizing hydros to allow user specification of custom smoothing 

    scale udpate rules.  Also a few minor fixes for generating ratio
spheres in 2D.
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Commits on Mar 1, 2024

  1. Screening TaylorImpact test to be skipped during debug build testing

    @jmikeowen
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  2. Modifying (and simplifying) TableKernel to use QuadraticInterpolator 

    for looking up nperh information for ideal H estimation.  Preparing
for adding new interpolators based on the second moment for our new
ASPH approach.
    @jmikeowen
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  3. Updating tests with reference changes

    @jmikeowen
    jmikeowen committed Mar 1, 2024
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  4. Cleanup

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  5. Updating TableKernel unit test

    @jmikeowen
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  6. Updating TensileRod reference data

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Commits on Mar 2, 2024

  1. One more test reference data update. It appears all tests are passing.

    @jmikeowen
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  2. Loosening a tolerance for a test that intermittently fails (nothing to 

    do with the changes in this branch).
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Commits on Mar 5, 2024

  1. Simplifying how we integrate for nperh reference lookups. Also 

    applying limits to the allowed nperh lookup range to ensure there's
something to sample from.  Brody's TestIntegrator function is failing
now for reasons I don't understand, so leaving that alone 'til I
figure out why.
    @jmikeowen
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  2. Reworked bisectRoot a bit, reinstantiating the y-tolerance for 

    convergence checking.
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Commits on Mar 6, 2024

  1. Adding initialization methods for CubicHermiteInterpolator, to be 

    consistent with QuadraticInterpolator
    @jmikeowen
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Commits on Mar 8, 2024

  1. Adding a linear interpolator based on linear regression

    @jmikeowen
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  2. Progress on SPH and ASPH ideal H

    @jmikeowen
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  3. Restoring monotonicity to nperh(Wsum) lookups

    @jmikeowen
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Commits on Mar 11, 2024

  1. Fixing a comment

    @jmikeowen
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  2. Adding plots testing ASPH with different aspect ratios

    @jmikeowen
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Commits on Mar 12, 2024

  1. Adding compiler guards

    @jmikeowen
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  2. Checkpoint

    @jmikeowen
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Commits on Mar 14, 2024

  1. Checkpoint on a crazy comb filter experiment

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Commits on Mar 18, 2024

  1. Extended interface for idealH in SmoothingScale methods to allow 

    zeroth, first, and 2 second moments be passed in.  Also updated all
the hydros that call these methods to compute those moments (untested still).
    @jmikeowen
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  2. Removing the temporary ASPHv2 object since we've folded that 

    functionality into the ordinary ASPH algorithm object now.
    @jmikeowen
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Commits on Mar 19, 2024

  1. More testing of the new ASPH ideas

    @jmikeowen
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  2. Interface update

    @jmikeowen
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Commits on Mar 21, 2024

  1. Changing default distribution method

    @jmikeowen
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  2. Checkpoint -- we have to make a radical change for the ideal ASPH H, 

    our current second moment does not reliably work
    @jmikeowen
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Commits on Mar 22, 2024

  1. Experimenting with a whole different ASPH idea based on extracting the 

    shape tensor using convex hulls.
    @jmikeowen
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Commits on Mar 25, 2024

  1. Adding ostream operator to Box1d

    @jmikeowen
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Commits on Mar 26, 2024

  1. Checkpoint

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  2. Using Boost::Geometry for 2D convex hull

    @jmikeowen
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  3. Protecting sqrt from generating a NaN

    @jmikeowen
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  4. A differnt ASPH experiment using summation second moments again

    @jmikeowen
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  5. Support for Vector2d natively in Boost::Geometryu

    @jmikeowen
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Commits on Mar 28, 2024

  1. Replace redundant calculation with function call

    @jmikeowen
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Commits on Mar 29, 2024

  1. Checkpoint

    @jmikeowen
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  2. Trying an alternate way to work our transform directly on H rather 

    than H^-1
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Commits on Apr 2, 2024

  1. Checkpoint -- I believe our problem now is that we need to correct for 

    off center of mass measurements of the second-moment.
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Commits on Apr 15, 2024

  1. Checkpoint

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Commits on Apr 16, 2024

  1. Checkpoint

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  2. Checkpoint

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Commits on Apr 18, 2024

  1. Adding python bindings for bisectRoot

    @jmikeowen
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  2. Checkpoint -- experimenting with RK

    @jmikeowen
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Commits on Apr 24, 2024

  1. INITIAL changes to make smoothing scale advancement it's own Physics 

    package. To revert to our prior model with everything in the hydro
schemes go to checkin before this one.  Not complete yet in this change.
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Commits on Apr 29, 2024

  1. Working though adding Python interface and changes for new independent 

    smoothing scale update package.
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Commits on May 6, 2024

  1. Getting more tests running with new smoothing scale package 

    approach.  This requires an interface change to building the CRK
package unfortunately.
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Commits on May 7, 2024

  1. Dodging deprecation warnings by judicious header inclusion 

    choices. Hopefully updating to a newer boost will make this better.
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Commits on May 8, 2024

  1. Working on a different convex hull approach to node volume selection

    @jmikeowen
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Commits on May 9, 2024

  1. Looks like using the convex hull as an optimizing precursor to 

    clipping for the Voronoi doesn't work well.  We can have collinear
points along the hull that are missed as neighbors.
    @jmikeowen
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  2. Generalized our Boost::Geometry trait for GeomVector

    @jmikeowen
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  3. Fiddling with different ways to measure the second moment

    @jmikeowen
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Commits on May 13, 2024

  1. Got things running with the separate SmoothingScale physics 

    packages. ASPH not great yet though...
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Commits on May 14, 2024

  1. Changing nperh to match our kernel choice for the 2D Noh problem

    @jmikeowen
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Commits on May 15, 2024

  1. Checkpoint

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  2. Merge branch 'bugfix/PalphaConstructor' into feature/ASPHv2

    @jmikeowen
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  3. Order of ops for iteration startup

    @jmikeowen
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  4. Checkpoint

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  5. Checkpoint

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Commits on May 16, 2024

  1. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
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  2. Averaging in sqrt(psi) seems better than the psi directly

    @jmikeowen
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  3. Making ASPH pure IntegrateH during a cycle, and only apply the IdealH 

    during finalize.
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  4. Experimenting with a crude artificial pair-wise pressure to push 

    points toward the cell centroids when using ASPH
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  5. Checkpoint

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Commits on May 20, 2024

  1. Experimenting with directly moving the points toward the local centroid

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Commits on May 22, 2024

  1. First stage getting the Voronoi cell geometry as a generic physics 

    package to provide geometry information for any other physics packages
in the cycle consistently.
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  2. Removing debug print

    @jmikeowen
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  3. Boundary condition fixes -- seems to correct ASPH iterateIdealH

    @jmikeowen
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Commits on May 23, 2024

  1. Very rough first cut at sub-point/cell pressure hourglass control

    @jmikeowen
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  2. Implemented 2D subcell pressure HG control

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Commits on May 24, 2024

  1. Converting controller iterateIdealH to find and use the physics package 

    smoothing scale method
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  2. Starting to use cell center of mass rather than centroid for filtering

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Commits on May 28, 2024

  1. Better dummy MPI wrapper protection

    @jmikeowen
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  2. Grabbing CellFaceFlags

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Commits on Jun 6, 2024

  1. Making node pair hashing independent of order (i,j <-> j,i)

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  2. Switched to HG forces acting pairwise rather than internal to points.… 

    … 1D results look good with subpoint hourglass control on.
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Commits on Jun 7, 2024

  1. Implementing 2D triangular sub-cell corrections

    @jmikeowen
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  2. Making 2D & 3D Voronoi geometries return full CellFaceFlags

    @jmikeowen
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  3. Allowing more interpolation kernels for 1D Sod test

    @jmikeowen
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  4. Moving Voronoi geometry calculation to start of step, which is 

    necessary for sub-cell hourglass control to have the correct ghost
nodes in it's pair matching
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  5. Fixing operator<<(Box1d)

    @jmikeowen
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  6. Fixing compiler guard

    @jmikeowen
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  7. Trying to figure out handing parallel correctly for subpoint pressures

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Commits on Jun 12, 2024

  1. Adding logic to clip polytopes for reflecting boundary enforcement

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  2. Spelling

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  3. Checkpoint working on pair-wise HG forces

    @jmikeowen
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  4. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
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  5. Fixes from merging with develop

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  6. Another develop merge bugfix

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Commits on Jun 27, 2024

  1. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
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  2. Fixed one problem with Voronoi cells building during the step related 

    to the update of ghost positions.  Still not right in our hourglass
filter however.
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Commits on Jun 28, 2024

  1. We messed up by a factor of the mass. This isn't right yet, but closer.

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Commits on Jul 19, 2024

  1. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
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Commits on Jul 20, 2024

  1. Catching up with Landon's changes

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Commits on Jul 22, 2024

  1. Sorted some problems for serial/no ghost points runs with the new 

    hourglass control
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Commits on Jul 23, 2024

  1. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
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Commits on Jul 24, 2024

  1. Working on our targeted test for hourglass filtering (1D)

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Commits on Jul 25, 2024

  1. Adding time step control for hourglass pressure filter

    @jmikeowen
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  2. More testing

    @jmikeowen
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Commits on Jul 26, 2024

  1. Found the latest problem with energy conservation

    @jmikeowen
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Commits on Jul 29, 2024

  1. Gah! Bug in ASPH H algorithm smoothing

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  2. Changing reference pressure for HG control, but not affecting ASPH Noh 

    results anymore since we fixed the ASPH idealH bug.
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  3. Defaulting to WendlandC4 kernel

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    jmikeowen committed Jul 29, 2024
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  4. Implemented 3D filter sub-pressures, and adding option to do direct 

    centroidal position displacements to the houglass object.  Doesn't
seem to work as well as the pressure filter at first glance.
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Commits on Jul 30, 2024

  1. Fixing a mysterious thread problem with ASPH

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    jmikeowen committed Jul 30, 2024
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  2. Changing a deffault

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    jmikeowen committed Jul 30, 2024
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Commits on Jul 31, 2024

  1. Merge branch 'develop' into feature/ASPHv2

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    jmikeowen committed Jul 31, 2024
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Commits on Aug 1, 2024

  1. Fiddling with the direct centroidal motion option

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    jmikeowen committed Aug 1, 2024
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Commits on Aug 5, 2024

  1. Learned a few things with a 2D hourglass direct test

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Commits on Aug 7, 2024

  1. Renaming filter->xfilter in script

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    jmikeowen committed Aug 7, 2024
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Commits on Aug 9, 2024

  1. Cleaned up some unnecessary variables/storage for the compatible ener… 

    …gy mode
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Commits on Aug 10, 2024

  1. Implementing 3D second-moment for tetrahedra and cleaning up warnings

    @jmikeowen
    jmikeowen committed Aug 10, 2024
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  2. Test update with new smoothing scale algorithm interface

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    jmikeowen committed Aug 10, 2024
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Commits on Aug 12, 2024

  1. Test updates

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    jmikeowen committed Aug 12, 2024
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Commits on Aug 13, 2024

  1. Fixing more tests (including a few actual problems)

    @jmikeowen
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  2. Contract bug fix

    @jmikeowen
    jmikeowen committed Aug 13, 2024
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  3. Updates for new smoothing scale physics interface

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    jmikeowen committed Aug 13, 2024
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  4. Test updates with new interface

    @jmikeowen
    jmikeowen committed Aug 13, 2024
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  5. More test fixes

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    jmikeowen committed Aug 13, 2024
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  6. DEM fixes

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    jmikeowen committed Aug 13, 2024
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  7. Test updates

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    jmikeowen committed Aug 13, 2024
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Commits on Aug 16, 2024

  1. Checkpoint

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    jmikeowen committed Aug 16, 2024
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  2. CubicHermiteInterpolator now uses a solve for the gradient values if … 

    …not provided. Also made tests more robust.
    @jmikeowen
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  3. Test updates with modified CubicHermiteInterpolator

    @jmikeowen
    jmikeowen committed Aug 16, 2024
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Commits on Aug 20, 2024

  1. Debugged a tolerance issue with ANEOS

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    jmikeowen committed Aug 20, 2024
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Commits on Aug 21, 2024

  1. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
    jmikeowen committed Aug 21, 2024
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  2. Fixing compile warnings

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    jmikeowen committed Aug 21, 2024
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  3. Cleaning up CLANG warnings. Also turning on warnings as errors for cl… 

    …ang in the CI.
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    jmikeowen committed Aug 21, 2024
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  4. Test robustness fix

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    jmikeowen committed Aug 21, 2024
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Commits on Aug 22, 2024

  1. Cleaned up clang warnings for optimized build

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    jmikeowen committed Aug 22, 2024
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  2. Fixing clang treat warnings as errors flag for CI

    @jmikeowen
    jmikeowen committed Aug 22, 2024
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  3. Physics::postStateUpdate now returns a bool indicating if boundary co… 

    …nditions should be applied
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    jmikeowen committed Aug 22, 2024
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Commits on Sep 4, 2024

  1. Adding compiler flags to help building on IBM blueos

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    jmikeowen committed Sep 4, 2024
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  2. Testing tolerance for BlueOS slightly different on Tensile Rod test

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    jmikeowen committed Sep 4, 2024
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Commits on Sep 11, 2024

  1. - Cleaned up ASPH implementation, removing unused code and variables. 

    - Making ASPH only require Voronoi cells when using IdealH. Potentially pretty big time savings for pure IntegrateH mode.
- Adding an optional function hook to modify the final ideal H calculation from user scripts.
    @jmikeowen
    jmikeowen committed Sep 11, 2024
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  2. Merge branch 'develop' into feature/ASPHv2

    @jmikeowen
    jmikeowen committed Sep 11, 2024
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  3. Making test robust with random seeds (and a few other improvements)

    @jmikeowen
    jmikeowen committed Sep 11, 2024
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  4. Added missing Python bindings

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    jmikeowen committed Sep 11, 2024
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Commits on Sep 13, 2024

  1. Moving -fvar-tracking-assignments-toggle to be on for PYB11 builds on… 

    … all GCC builds to avoid symbols overflows during compilation
    @jmikeowen
    jmikeowen committed Sep 13, 2024
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Commits on Sep 18, 2024

  1. Changing -fvar-tracking-assignments-toggle to -fno-var-tracking-assig… 

    …nments which is explicitly what we want for PYB11 targets
    @jmikeowen
    jmikeowen committed Sep 18, 2024
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Commits on Sep 19, 2024

  1. Updating Spheral Release notes

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    jmikeowen committed Sep 19, 2024
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Commits on Sep 20, 2024

  1. Adding more flexibility to the IdealH user override functor in the AS… 

    …PH object
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    jmikeowen committed Sep 20, 2024
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Commits on Sep 23, 2024

  1. Fixed some problems with the initial iterateIdealH. Also adding a 

    specialized user-overridable functor for the ASPH ideal H user
filter.  I've also excluded surface points from the ideal H
replacement as well.  With these changes we can now run 2D slab
ablation problems well using IntegrateH or IdealH.
    @jmikeowen
    jmikeowen committed Sep 23, 2024
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