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v2024.06.0 Release #280

Merged
merged 220 commits into from
Jun 30, 2024
Merged

v2024.06.0 Release #280

merged 220 commits into from
Jun 30, 2024

Commits on Jul 14, 2022

  1. bug-fix GSPH reimann gradients from sametimeSPHderivs

    @jmpearl
    jmpearl committed Jul 14, 2022
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  2. exposing the GSPH volume field to Python

    @jmpearl
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  3. bug-fix GSPH riemann deriv options

    @jmpearl
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  4. update generic GSPH

    @jmpearl
    jmpearl committed Jul 14, 2022
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  5. adding MFM/GSPH to acoustic test

    @jmpearl
    jmpearl committed Jul 14, 2022
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  6. updating Llyods algo

    @jmpearl
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  7. updating RT tests

    @jmpearl
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  8. updating KH tests

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Commits on Jul 31, 2022

  1. storing for merge

    @jmpearl
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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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  3. GSPH RiemannSolver interface update 

    removing GHLLC (depricate), adding a ArtificialViscosity implementation for direct comparison in the GSPH paper. Might need to rename to make it less confusing with the AV class heirarchy in Spheral
    @jmpearl
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Commits on Aug 7, 2022

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Sep 7, 2022

  1. Merge branch 'develop' into solidGSPH

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Commits on Sep 22, 2022

  1. merging develop

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Commits on Sep 30, 2022

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Oct 5, 2022

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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  2. MFV placeholders

    @jmpearl
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  3. Merge branch 'solidGSPH' of https://github.com/LLNL/spheral into soli… 

    …dGSPH
    @jmpearl
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Commits on Oct 19, 2022

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Nov 2, 2022

  1. GSPH new gradient options

    @jmpearl
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  2. GSPH new gradient options added to MFM

    @jmpearl
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  3. GSPH new gradient options added to MFV

    @jmpearl
    jmpearl committed Nov 2, 2022
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  4. GSPH Acoustic test fiddling

    @jmpearl
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  5. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Nov 3, 2022

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Dec 26, 2022

  1. updating SolidGSPH riemann gradient update method 

    update policy is now used to handle the Riemann gradients that are stored between steps. for problems with const bc and initial pressure gradients (hydrostatic atmospheres etc...) the pressure gradient will need to be given initial conditions similar to eps or rho or any other field
    @jmpearl
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  2. improved implementation of GSPH initialization of pressure and veloci… 

    …ty gradient on start up
    @jmpearl
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Commits on Dec 27, 2022

  1. updating GSPH for cleaner initialization implementation 

    this commit removes the isFirstCycle switch which I was using to hackishly initialize the spatial derivatives. When switching over to using the initializeOnStartUp method the switch never flipped messing up the gradients.
    @jmpearl
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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Jan 10, 2023

  1. removing some uneccessary BC applications

    @jmpearl
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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Jan 14, 2023

  1. from Mike's DEM fix realized GSPH/MFM both assumed they were the only… 

    … DvDt modifiers
    @jmpearl
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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Jan 15, 2023

  1. volume missing from restart read/write methods

    @jmpearl
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  2. bugfix GSPH eval-derivs

    @jmpearl
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Commits on Jan 24, 2023

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Mar 30, 2023

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on May 3, 2023

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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  2. Merge branch 'solidGSPH' of https://github.com/LLNL/spheral into soli… 

    …dGSPH
    @jmpearl
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Commits on May 14, 2023

  1. Merge branch 'solidGSPH' of https://github.com/llnl/Spheral into soli… 

    …dGSPH
    @jmpearl
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Commits on May 19, 2023

  1. solidGSPH updated to python3

    @jmpearl
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  2. update

    @jmpearl
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  3. Merge branch 'solidGSPH' of https://github.com/llnl/Spheral into soli… 

    …dGSPH
    @jmpearl
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Commits on Jun 15, 2023

  1. step

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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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  3. typo in Noh test

    @jmpearl
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  4. GSPH updating to new convience constructror format

    @jmpearl
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Commits on Jun 19, 2023

  1. GSPH: adding BJ limiter

    @jmpearl
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  2. GSPH policy to replace state w/ other state

    @jmpearl
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  3. GSPH addings DrhoDx to riemann solver

    @jmpearl
    jmpearl committed Jun 19, 2023
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  4. updating MFM and GSPH to new HLLC inputs

    @jmpearl
    jmpearl committed Jun 19, 2023
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  5. check point on an ALESPH MFV extension

    @jmpearl
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Commits on Aug 10, 2023

  1. generalized compatible energy scheme when there's some fluxing going on

    @jmpearl
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  2. typo was causing unecessary template case to get built upon compilation

    @jmpearl
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  3. generalize HLLC zero check

    @jmpearl
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  4. beta version of MFV up and running

    @jmpearl
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  5. adding MFV to Noh

    @jmpearl
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  6. Merge branch 'develop' into solidGSPH

    @jmpearl
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  7. bugfix cmake GSPH

    @jmpearl
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Commits on Aug 14, 2023

  1. MFV playing with new Ngb smoothing length method

    @jmpearl
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  2. MFV: updating Noh

    @jmpearl
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Commits on Aug 15, 2023

  1. updates to sedov

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Commits on Sep 27, 2023

  1. checkpoint

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Commits on Sep 28, 2023

  1. GSPH: removing uneccessary policy

    @jmpearl
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Commits on Oct 15, 2023

  1. stowing for a pull

    @jmpearl
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  2. Merge branch 'develop' into solidGSPH

    @jmpearl
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Commits on Jan 10, 2024

  1. update GSPH branch for the bigmerge

    @jmpearl
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  2. updating some tests to add MFV and bugfix

    @jmpearl
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  3. first pass as this mega-merge

    @jmpearl
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  4. more merge sorting

    @jmpearl
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  5. updating MFV for the big merge

    @jmpearl
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Commits on Jan 11, 2024

  1. GSPH: making some comments more descriptive

    @jmpearl
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Commits on Jan 15, 2024

  1. bugfix MFV update policies

    @jmpearl
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Commits on Feb 6, 2024

  1. Reassigning blt docs target so we can run 'make docs'. Using the BLT … 

    …provided documentation funciton will not work with the current BLT implementation.
    @mdavis36
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  2. Removing old FindSphinx.cmake file.

    @mdavis36
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Commits on Feb 11, 2024

  1. adding Spheral::Vector an an any class, we might want to switch to a … 

    …std::variant and visitor format for the state contents
    @jmpearl
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  2. first crack at fixing the moving bc issue

    @jmpearl
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  3. letting the solid BCs enroll there own stuff

    @jmpearl
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  4. updating DEM timers

    @jmpearl
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  5. adding more solid bc fields to state

    @jmpearl
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Commits on Feb 17, 2024

  1. We haven't been testing RZ CRK (not really working anyway), but its 

    constructor is out of date.
    @jmikeowen
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  2. Getting Taylor-anvil script up to date, and adding it as a standard 

    integration test to be checked.
    @jmikeowen
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Commits on Feb 20, 2024

  1. We want these running with ASPH

    @jmikeowen
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Commits on Feb 22, 2024

  1. Merge pull request #267 from LLNL/bugfix/TaylorAnvil 

    Adding Taylor-anvil to standard integration tests
    @jmikeowen
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Commits on Feb 29, 2024

  1. Added compiler, MPI, and python paths to export configure script for … 

    …SpheralC to use when necessary, removed BLT path export
    @ldowen
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Commits on Mar 1, 2024

  1. updating the DEM SB update approach

    @jmpearl
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  2. Merge branch 'develop' into bugfix/demSolidBCs

    @jmpearl
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  3. merging dev into solidGSPH

    @jmpearl
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  4. GSPH clean up post merge

    @jmpearl
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Commits on Mar 2, 2024

  1. adding unique id as a solid bc property

    @jmpearl
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  2. Improving DEM solidBC unique indices to accomdate mid simulation remo… 

    …val.

This improvement addresses a bug found by Sean Wiggins where particles were erronously getting stuck on solid boundaries if one was deleted. The previous unique index scheme caused pairwise integrate properties to inadvertently get transfered to another solid BC if one was deleted. This commit also gives the user the option to delete a solid bc by passing that bc to the DEM package
    @jmpearl
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  3. adding to / modifying python exposure

    @jmpearl
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  4. moving the solid BC name into the solid bc

    @jmpearl
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  5. DEM cleaning out old commented out sections

    @jmpearl
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  6. DEM more cleaning

    @jmpearl
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Commits on Mar 3, 2024

  1. DEM cleaning out some print diagnostics

    @jmpearl
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  2. DEM: adding field to track max overlap

    @jmpearl
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Commits on Mar 4, 2024

  1. LinearSpringDEM replacing redundent code with inline functions

    @jmpearl
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  2. DEM adding ats tests for rolling and torsion on surfaces

    @jmpearl
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  3. DEM 3d impact squares - making it reproducable

    @jmpearl
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  4. DEM adding Scalars to allowed state fields

    @jmpearl
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Commits on Mar 5, 2024

  1. DEM misplaced semicolon caused debug build failure

    @jmpearl
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Commits on Mar 7, 2024

  1. DEMs max overlap needed to be restartable"

    @jmpearl
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  2. Provide better guard for setting compiler paths

    @ldowen
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Commits on Mar 18, 2024

  1. making fast time stepping optional to allows integrator's updateBCFre… 

    …q option
    @jmpearl
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  2. some DEM tests assume fast time stepping is on

    @jmpearl
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Commits on Mar 19, 2024

  1. DEM update ATS and tangentialDampTerm Coeffs

    @jmpearl
    jmpearl committed Mar 19, 2024
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  2. DEM update release notes

    @jmpearl
    jmpearl committed Mar 19, 2024
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  3. DEM bugfix misnamed ats

    @jmpearl
    jmpearl committed Mar 19, 2024
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Commits on Mar 20, 2024

  1. DEM ats bugfix for particle-wall and more checks added to particle-pa… 

    …rticle
    @jmpearl
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  2. DEM ats particle-particle bugfix

    @jmpearl
    jmpearl committed Mar 20, 2024
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  3. Updated release notes

    @ldowen
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Commits on Mar 21, 2024

  1. Merge pull request #268 from LLNL/bugfix/improve_target_export 

    Improve target export
    @ldowen
    ldowen authored Mar 21, 2024
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Commits on Mar 25, 2024

  1. Moving Spheral python install into lib/pythonX.Y/site-packages dir.

    @mdavis36
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  2. Adding documentation on how to use Docker Dev environments.

    @mdavis36
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Commits on Mar 26, 2024

  1. Updated blt and PYB11Generator submodules, fixed cmake logic for usin… 

    …g latest BLT
    @ldowen
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  2. Using to determine OS when SYS_TYPE is not available. Changing x86_64… 

    … to ubuntu20.04; copying x86_64 to generic dir; Adding concretizer options for generic architecture targeting w/docker builds.
    @mdavis36
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Commits on Mar 28, 2024

  1. Adding documentation on editing packages.yaml files for external users.

    @mdavis36
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  2. Adding generic config dir.

    @mdavis36
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  3. Guarding python file install for CXXONLY builds.

    @mdavis36
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  4. Command fixes for using docker env for developing Spheral.

    @mdavis36
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  5. Merge tag 'v2024.01.1' into devops/docker-envs

    @mdavis36
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  6. Release notes; Adding --fail-fast option to spack install.

    @mdavis36
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  7. Split spack install into separate commands, one for tpls and one for … 

    …generating our host-config file.
    @mdavis36
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Commits on Mar 29, 2024

  1. Merge pull request #271 from LLNL/devops/docker-envs 

    Devops/docker envs
    @mdavis36
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  2. Merge branch 'develop' into update/update_TPLs

    @ldowen
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Commits on Apr 3, 2024

  1. adding a test for simple constant moving bc

    @jmpearl
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  2. DEM: updating some solid bcs to allow rectilinear motion

    @jmpearl
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  3. DEM: test rename

    @jmpearl
    jmpearl committed Apr 3, 2024
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Commits on Apr 8, 2024

  1. DEM: solid bc issue reproducer

    @jmpearl
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  2. updating some solid bc stuff

    @jmpearl
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Commits on Apr 12, 2024

  1. merging dev into DEM

    @jmpearl
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Commits on Apr 15, 2024

  1. merge resolution

    @jmpearl
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  2. DEM fixing a name collision

    @jmpearl
    jmpearl committed Apr 15, 2024
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  3. DEM BC updates RotatingDrum working

    @jmpearl
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Commits on Apr 19, 2024

  1. Significant changes to spack recipes and minor changes to tpl-manager

    @ldowen
    ldowen committed Apr 19, 2024
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Commits on Apr 24, 2024

  1. Spheral spack package is working without versions being set, ran into… 

    … issue with exporting mpi and openmp through new blt interface
    @ldowen
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  2. Reverting some things back to how it was done before regarding cmake … 

    …exports
    @ldowen
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Commits on Apr 25, 2024

  1. Fix dev-build tpl manager command

    @ldowen
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Commits on May 1, 2024

  1. Combined separate TPL install and dev-build Spack calls into single i… 

    …nstall function to help prevent TPL build fails, updated tpl-managers exec call and added C++ TPL versions back
    @ldowen
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  2. Updated spack commit hash

    @ldowen
    ldowen committed May 1, 2024
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Commits on May 2, 2024

  1. Add echo check for tpl-manager command function

    @ldowen
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  2. Added zlib provider for zlib-api in spack packages, added system exte… 

    …rnals for blueOS package
    @ldowen
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Commits on May 6, 2024

  1. Removed blas and awk providers, added build_job 54 back in

    @ldowen
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  2. Update scripts/devtools/tpl-manager.py 

    Co-authored-by: Michael Davis <davis291@llnl.gov>
    @ldowen @mdavis36
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  3. Update scripts/devtools/tpl-manager.py 

    Co-authored-by: Michael Davis <davis291@llnl.gov>
    @ldowen @mdavis36
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  4. Merge branch 'update/update_TPLs' of https://github.com/LLNL/spheral … 

    …into update/update_TPLs
    @ldowen
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  5. Updated blueos package file, added qhull version number to spheral pa… 

    …ckage recipe
    @ldowen
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  6. Removed cuda versions 8 and 9 from blueos package file

    @ldowen
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  7. Added netlib-lapack as blas provider

    @ldowen
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Commits on May 7, 2024

  1. Removed py-pillow provider

    @ldowen
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  2. Bring blas and pil providers back, add py-pillow back as a dependency… 

    … of spheral
    @ldowen
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  3. Set externals and providers to match axom

    @ldowen
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  4. Removed second lapack external on blueOS

    @ldowen
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  5. Add externals to ubuntu 20 package file

    @ldowen
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Commits on May 8, 2024

  1. Test where only zlib provider for toss

    @ldowen
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  2. Added providers back in since that did not fix the issue

    @ldowen
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Commits on May 9, 2024

  1. Testing what happens when numpy version number is removed

    @ldowen
    ldowen committed May 9, 2024
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  2. Brought numpy version back, removed python module load from gitlab sc… 

    …ript to stop scipy from using the wrong pkg-config on the CZ
    @ldowen
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Commits on May 10, 2024

  1. Provide path to dev_path option in tplmanager

    @ldowen
    ldowen committed May 10, 2024
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Commits on May 12, 2024

  1. whoopsie

    @jmpearl
    jmpearl committed May 12, 2024
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Commits on May 13, 2024

  1. DEM restart for solid bcs

    @jmpearl
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  2. No longer using external netlib-lapack on blueos

    @ldowen
    ldowen committed May 13, 2024
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  3. Fixing an erroneous range check in Palpha porosity that was supposed … 

    …to be deleted
    @jmikeowen
    jmikeowen committed May 13, 2024
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  4. updating release notes

    @jmpearl
    jmpearl committed May 13, 2024
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Commits on May 14, 2024

  1. Merge branch 'develop' into solidGSPH

    @jmpearl
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  2. GSPH: commenting out unused variables

    @jmpearl
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  3. GSPH: cleaning up unusued vars and punting H algo til after Mike's up… 

    …date to H
    @jmpearl
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  4. GSPH: removing HstretchTensor and more unused vars 

    only commenting out the Hstretch stuff b/c I'll want to create a H evolution phys package after mike's update which recreates what Hopkins did in his 2015 paper
    @jmpearl
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  5. GSPH : remove unused var from massfluxpolicy

    @jmpearl
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  6. GSPH: unused var in the MFVIncrementVelocityPolicy

    @jmpearl
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  7. Merge pull request #269 from LLNL/bugfix/demSolidBCs 

    DEM Solid Boundary Bug Fix
    @jmpearl
    jmpearl authored May 14, 2024
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  8. Merge branch 'develop' into solidGSPH

    @jmpearl
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  9. Update to the 0.22.0 Spack release hash

    @ldowen
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  10. GSPH: blueos didn't like the for loop

    @jmpearl
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  11. Removed openblas and switched back to netlib-lapack for the ubuntu pa… 

    …ckage configurations
    @ldowen
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  12. Merge branch 'develop' into update/update_TPLs

    @ldowen
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  13. GSPH: another omp incompatible loop

    @jmpearl
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  14. Removed external netlib-lapack from ubuntu package config file

    @ldowen
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  15. Removed external cmake for ubuntu build for now

    @ldowen
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Commits on May 15, 2024

  1. Fixed a terrible bug that was causing standard ASPH hydros (not FSI or 

    CRK) to be incorrect with non-unit aspect ratio H tensors.  Not the
purpose of this branch, but we want this fix in develop ASAP so it
will come along.
    @jmikeowen
    jmikeowen committed May 15, 2024
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  2. Adding optional user specified smoothing scale method for SPH, FSISPH, 

    and CRKSPH
    @jmikeowen
    jmikeowen committed May 15, 2024
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  3. Put spack install spec in tpl-manager in quotes

    @ldowen
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  4. Brought py-ats recipe back to avoid having to bring in py-poetry, try… 

    …ing double quotes around spec
    @ldowen
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  5. RZ CRK fix

    @jmikeowen
    jmikeowen committed May 15, 2024
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Commits on May 17, 2024

  1. Going back to using dev-build command to see if that still works

    @ldowen
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  2. Added quiet flag to dev-build

    @ldowen
    ldowen committed May 17, 2024
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Commits on May 23, 2024

  1. Fixed versions for all Spheral dependencies in spack recipe

    @ldowen
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  2. Set py-pillow version to what is used by ubuntu

    @ldowen
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  3. Fix scipy to ubuntu build version as well

    @ldowen
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Commits on May 28, 2024

  1. Updated the upstream location

    @ldowen
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Commits on May 30, 2024

  1. Updated upstream directory name

    @ldowen
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Commits on May 31, 2024

  1. Update upstream directory again

    @ldowen
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Commits on Jun 4, 2024

  1. GSPH: updating tests for merge

    @jmpearl
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  2. GSPH updating release notes

    @jmpearl
    jmpearl committed Jun 4, 2024
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  3. Change CMake system to allow for multiple modules per source directory

    @ldowen
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  4. Removed pkg-config and pic variant lines from ubuntu spack package

    @ldowen
    ldowen committed Jun 4, 2024
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Commits on Jun 5, 2024

  1. GSPH updating Yee to remove llyod

    @jmpearl
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  2. Split KernelIntegrator up into two modules

    @ldowen
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  3. Updated release notes

    @ldowen
    ldowen committed Jun 5, 2024
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  4. Split up FieldList and ArithmeticFieldList

    @ldowen
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Commits on Jun 6, 2024

  1. Merge pull request #273 from LLNL/solidGSPH 

    GSPH update
    @jmpearl
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  2. Remove repeated DESTINATION in cmake file

    @ldowen
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Commits on Jun 7, 2024

  1. Merge branch 'develop' into feature/flexible_python_targets

    @ldowen
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  2. Merge branch 'develop' into update/update_TPLs

    @ldowen
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  3. Moved MinMaxFieldList to ArithmeticFieldList module

    @ldowen
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Commits on Jun 9, 2024

  1. Merge branch 'develop' into feature/docs-target

    @mdavis36
    mdavis36 authored Jun 9, 2024
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Commits on Jun 10, 2024

  1. Update release notes

    @ldowen
    ldowen committed Jun 10, 2024
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Commits on Jun 11, 2024

  1. Merge pull request #277 from LLNL/feature/flexible_python_targets 

    Feature/flexible python targets
    @ldowen
    ldowen authored Jun 11, 2024
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  2. Merge branch 'develop' into update/update_TPLs

    @ldowen
    ldowen committed Jun 11, 2024
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Commits on Jun 12, 2024

  1. Merge branch 'develop' into bugfix/PalphaConstructor

    @jmikeowen
    jmikeowen committed Jun 12, 2024
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  2. Merge branch 'bugfix/PalphaConstructor' of github.com:LLNL/spheral in… 

    …to bugfix/PalphaConstructor
    @jmikeowen
    jmikeowen committed Jun 12, 2024
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Commits on Jun 18, 2024

  1. Merge pull request #272 from LLNL/update/update_TPLs 

    Update Spack to 0.22
    @ldowen
    ldowen authored Jun 18, 2024
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Commits on Jun 20, 2024

  1. Merge branch 'develop' into bugfix/PalphaConstructor

    @jmikeowen
    jmikeowen committed Jun 20, 2024
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Commits on Jun 21, 2024

  1. Merge branch 'develop' into feature/docs-target

    @mdavis36
    mdavis36 authored Jun 21, 2024
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  2. Found the source for a race condition error in ACRK Noh test

    @jmikeowen
    jmikeowen committed Jun 21, 2024
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Commits on Jun 25, 2024

  1. Merge pull request #274 from LLNL/bugfix/PalphaConstructor 

    Bugfixes for P-alpha constructor and ASPH algorithm
    @mdavis36
    mdavis36 authored Jun 25, 2024
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  2. Merge branch 'develop' into feature/docs-target

    @mdavis36
    mdavis36 authored Jun 25, 2024
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Commits on Jun 27, 2024

  1. Merge pull request #262 from LLNL/feature/docs-target 

    CMake docs target
    @mdavis36
    mdavis36 authored Jun 27, 2024
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  2. Changes for documenting 2024.06.0 release.

    @mdavis36
    mdavis36 committed Jun 27, 2024
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