Environments

Conda

Anaconda Python environment on gadi

• Follow the instructions on: http://climate-cms.wikis.unsw.edu.au/Conda

Creating a personal environment for debugging

• http://climate-cms.wikis.unsw.edu.au/Conda#Creating_personal_environments

Steps for debugging Payu

• Populate the ~/.condarc by following the instructions above.
• $ conda deactivate
• If that returns the following error, simply follow the instructions, then log out and log back in:

CommandNotFoundError: Your shell has not been properly configured to use 'conda deactivate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.

• Create a new Conda environment and install pip: $ conda create -n <environment-name> -c conda-forge pip
• List the Conda environments: $ conda env list
• Activate the Conda environment: $ conda activate <environment-name>
• $ cd <payu-source-repository>
• $ pip install -e .