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1. uclahs-cds/package-moPepGen uclahs-cds/package-moPepGen Public

   Multi-Omics Peptide Generator

   Python 6 1

2. uclahs-cds/metapipeline-DNA uclahs-cds/metapipeline-DNA Public

   Nextflow pipeline to convert BAM to FASTQ, align, perform QC, assess targeted coverage, call gSNP, call sSNV, call mtSNV, call SVs, call sCNA, and perform subclonal reconstruction

   Nextflow 4

3. uclahs-cds/tool-NFTest uclahs-cds/tool-NFTest Public

   CLI to automate Nextflow pipeline testing

   Python 11 1

4. exceRNApipeline exceRNApipeline Public

   Data processing pipeline for extracellular small RNA-seq from human specimen

   C++ 1

5. HTSet HTSet Public

   R package to store, manipulate, analyze, and visualize high through-put experiment data

   R

6. genomic-algorithms genomic-algorithms Public

   A collection of genomic algorithms implemented with python and c++

   C++