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docker-Delly

Repository for the Boutros Lab Delly Dockerfile, "an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data."

This image can be found in docker-Delly's GitHub package page here.

Documentation

Delly GitHub repository here

Version

Tool Version
Delly 1.2.9

Discussions


Contributors

Please see list of Contributors at GitHub.


References

  1. Tobias Rausch, Thomas Zichner, Andreas Schlattl, Adrian M. Stuetz, Vladimir Benes, Jan O. Korbel. DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics. 2012 Sep 15;28(18):i333-i339. https://doi.org/10.1093/bioinformatics/bts378

License

Author: 'Timothy Sanders', 'Yu Pan', 'Mohammed Faizal Eeman Mootor'

docker-Delly is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.

docker-Delly can be used to create a docker instance to use the Delly tool.

Copyright (C) 2021-2024 University of California Los Angeles ("Boutros Lab") All rights reserved.

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.