usearch
Here are 10 public repositories matching this topic...
A clojure wrapper for usearch, a fast open-source search & clustering engine for vectors.
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Feb 29, 2024 - Clojure
Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.
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Jan 6, 2023 - HTML
Sequence analysis using USEARCH pipelines
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Jan 13, 2021 - Shell
This is a workflow for 16S rRNA analysis.
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Aug 30, 2021 - Shell
InDels analysis of CRISPR lines by NGS amplicon sequencing technology for a multicopy gene family.
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Dec 25, 2021 - Python
These scripts were used to bioinformatically process the NGS data associated with the manuscript entitled "Illuminating the bacterial microbiome of Australian ticks from companion animals with next-generation sequencing", authored by Telleasha L. Greay, Kimberly L. Evasco, Megan L. Evans, Paola Magni, Una M. Ryan and Peter J. Irwin. The raw data…
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Jun 3, 2021 - Shell
Markdown documentation for USEARCH 11 (see drive5.com for offical docs)
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Aug 8, 2019 - Perl
Code and data used for analysis and estimation of invertebrate biodiversity on a temperate forested island (Hauturu) based on DNA barcodes and soil DNA metabarcoding data.
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Sep 6, 2018 - R
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