corrected dockerfile for dev

Dockerfile.dev

@@ -2,7 +2,8 @@
 # You could directly edit the source code at `/home/brkraw to make changes. Or you could mount your brkraw code folder to /home/brkraw
 
 # HOW TO USE:
-# 1: BUILD IMAGE: run 'docker build - < Dockerfile.dev -t <IMAGE_NAME>'
+# CHANGE THIS FILENAME TO Dockerfile
+# 1: BUILD IMAGE: run 'docker build . -t <IMAGE_NAME>'
 # 2: docker run -it -e DISPLAY=$DISPLAY     \
 #    -u=$(id -u $USER):$(id -g $USER)       \
 #    -v /tmp/.X11-unix:/tmp/.X11-unix:rw    \
@@ -15,23 +16,33 @@ RUN apt-get update && apt-get install -y \
     build-essential \
     curl \
     software-properties-common \
-    git \
-    && rm -rf /var/lib/apt/lists/*
-
+    git 
+RUN apt-get install -y make gcc libfftw3-dev liblapacke-dev libpng-dev libopenblas-dev
 RUN apt-get install tk -y
+RUN rm -rf /var/lib/apt/lists/*
+
+#BART
+RUN wget https://github.com/mrirecon/bart/archive/refs/tags/v0.9.00.tar.gz \
+&& tar zxvpf v0.9.00.tar.gz && rm v0.9.00.tar.gz
+WORKDIR /bart-0.9.00
+RUN make
+WORKDIR /
+RUN echo '[Default]\ntoolbox_path = /bart-0.9.00/' > /root/.brkbartrc
+ENV TOOLBOX_PATH=/bart-0.9.00
+ENV PATH=$TOOLBOX_PATH:$PATH
 
 # INSTALL BRKRAW
 WORKDIR /home
 RUN mkdir ./brkraw
 WORKDIR /home/brkraw
 
 # COPY is not working currently
-# COPY . .
+COPY . .
 
 # RUN git clone only clones files 
 # into current dir not into separte dir
-RUN git clone https://github.com/timwahoo/brkraw.git .
-RUN python -m pip install .
+#RUN git clone https://github.com/timwahoo/brkraw.git .
+RUN python -m pip install --editable /home/brkraw
 
 # INSTALL BRKRAW-BART
 WORKDIR /home