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index_fix

index_fix #42

Workflow file for this run

name: test
on:
# this workflow triggered on below condition [push, pull_request]
push:
branches: [ main ]
pull_request:
branches: [ "*" ]
# cancel previous similar workflow runs
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test_cli:
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
os: [ubuntu-latest, windows-latest, macos-latest]
fail-fast: false
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Set up python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install package
run: |
python -m pip install --upgrade pip
pip install .
- name: Version and help
run: |
brkraw --version
brkraw --help
- name: "smoke end-to-end test: use CLI on tutorial data"
run: make demo
test_tutorial:
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
os: [ubuntu-latest, windows-latest, macos-latest]
fail-fast: false
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Set up python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install .[dev]
pip install .[SimpleITK]
- name: Install tutorial
run: make tests/tutorials
- name: Test tutorial notebook
run: |
python -m pytest --nbmake tests/tutorials/JupyterNotebooks/01_GettingStarted.ipynb