Fix/compute_neighbors, issue #1212 #1229
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#1212
scv.pp.moments(adata, n_pcs= int , n_neighbors= int )
Returns:
TypeError: Neighbors.compute_neighbors() got an unexpected keyword argument 'write_knn_indices'
The argument write_knn_indices was deprecated in a previous commit (see scanpy commit 1fd6c46)
Removing 'write_knn_indices' arg from the compute_neighbors method call within scv.pp.moments does not seem to affect downstream analysis
Lmk what you think @WeilerP