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PlastidPipeline

Current name: Plastid Pipeline

The current (in development) documentation: PlastidPipeline Google Docs

snakemake --profile resources/simple/ --configfile config/config.yaml --resources chrome=1 --use-envmodules --use-conda --conda-prefix /scratch/sjannalda/projects/PlastidTutorial/envs --restart-times 3

To run the pipeline on the HPC: snakemake --profile resources/simple/ --configfile config/config.yaml --resources chrome=1 --use-envmodules --use-conda

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