Releases · quantori/edema-quantification

What's Changed

Create an inference pipeline for lung segmentation by @sriva-e in #2
Initialize DVC and upload lung segmentation models by @ViacheslavDanilov in #4
Boundary extraction by @sriva-e in #5
Combine metadata files by @sriva-e in #6
Extract subset from the MIMIC dataset by @ViacheslavDanilov in #7
Stack frontal and lateral images by @ViacheslavDanilov in #8
Supervisely Dataset Conversion by @ViacheslavDanilov in #9
COCO dataset creation by @ViacheslavDanilov in #10
Update lung segmentation by @ViacheslavDanilov in #11
Visualize and validate COCO dataset by @ViacheslavDanilov in #13
Implement pre-commits by @ViacheslavDanilov in #12
Readme by @ViacheslavDanilov in #14
Change the project structure by @ViacheslavDanilov in #15
MLFlow integration by @ViacheslavDanilov in #16
Integrate prototype model by @mak-en in #17
Update MLFlow tracking by @ViacheslavDanilov in #18
Fix box center coordinates by @ViacheslavDanilov in #19
Update environment by @ViacheslavDanilov in #20
Update SLY-to-INT converter by @ViacheslavDanilov in #21
Continuous Integration by @ViacheslavDanilov in #22
Hydra implementation by @ViacheslavDanilov in #24
Implement DVC pipeline by @ViacheslavDanilov in #25
Dry run different models by @ryndovaira in #23
Fix floating point coordinates by @ryndovaira in #27
Reset annotation ID when class ID does not exist by @ryndovaira in #28
Implement inference pipeline by @ryndovaira in #29
Upload labeled datasets to S3/DVC by @ViacheslavDanilov in #32
Implement a pipeline for custom augmentation by @ryndovaira in #30
Fix conf_threshold assignment by @ryndovaira in #31
Visualization pm model by @mak-en in #34
Add parameters to PM config by @mak-en in #36
Update datasets and their metadata by @ViacheslavDanilov in #33
Modify training pipeline by @ViacheslavDanilov in #35
Visualize and evaluate detections by @ryndovaira in #37
Bugfix/remove lateral images by @mak-en in #39
Anchor generator by @ryndovaira in #38
Set batch size for the detection pipeline by @ryndovaira in #41
Updating img_scale in all pipelines by @ryndovaira in #42
Implement additional backbones (ResNet-50 and VGG-16) by @mak-en in #43
Implement Non Maximum Suppression by @ViacheslavDanilov in #40
Implement Faster R-CNN by @ViacheslavDanilov in #45
Implement model evaluation using threshold ranges by @ViacheslavDanilov in #46
Implement ResNet-50 encoder by @mak-en in #47
Edema pipeline by @ViacheslavDanilov in #48
Exclude heart, artery and bronchus from COCO dataset by @ViacheslavDanilov in #51
Implement box fuser by @mak-en in #52
Upload Faster RCNN models to DVC by @ViacheslavDanilov in #53
Update training dataset and pipeline by @ViacheslavDanilov in #54
Fix SLY dataset by @ViacheslavDanilov in #56
Implement IoU threshold by @mak-en in #57
Fix the prob_maps bug in MapFuser by @mak-en in #58
Split subsets in the interim dataset by @ViacheslavDanilov in #59
Visualize pipeline results by @ryndovaira in #60
Update DVC datasets by @ViacheslavDanilov in #62
Implement classification evaluator by @mak-en in #61
Fix the coordinate shift of the ground truth bboxes by @mak-en in #63
Feature detection models by @ViacheslavDanilov in #64
Detection evaluator implementation by @ViacheslavDanilov in #65
Reimplement predict pipline by @mak-en in #66
Train single-class models by @ViacheslavDanilov in #67
Upgrade visualization by @ViacheslavDanilov in #68
Update project readme by @ViacheslavDanilov in #69