PREP: python 3.10 update

qiime2 · Apr 22, 2024 · 9d88b0e · 9d88b0e
1 parent 20cfd9a
commit 9d88b0e
Showing 1 changed file with 18 additions and 17 deletions.
diff --git a/2024.5/amplicon/passed/seed-environment-conda.yml b/2024.5/amplicon/passed/seed-environment-conda.yml
@@ -4,18 +4,18 @@ channels:
 - bioconda
 - defaults
 dependencies:
-- biom-format=2.1.14
-- h5py=3.8.0
-- hdf5=1.14.0
-- mafft=7.520
-- matplotlib=3.6.0
+- biom-format=2.1.15
+- h5py=3.11.0
+- hdf5=1.14.3
+- mafft=7.525
+- matplotlib=3.8.4
 - notebook=6.5.5
-- numpy=1.24.4
-- pandas=1.5.3
-- parsl=2023.12.04
-- patsy=0.5.3
-- pillow=9.4.0
-- python=3.8
+- numpy=1.26.4
+- pandas=2.2.2
+- parsl=2024.4.15
+- patsy=0.5.6
+- pillow=10.3.0
+- python=3.10
 - q2-alignment=2024.5.0.dev0+1.g3a9c58b
 - q2-composition=2024.5.0.dev0
 - q2-cutadapt=2024.5.0.dev0
@@ -42,13 +42,14 @@ dependencies:
 - q2galaxy=2024.5.0.dev0+2.ga124fa1
 - q2templates=2024.5.0.dev0
 - qiime2=2024.5.0.dev0+2.g27f5ec0
-- r-base=4.2.2
+- r-base=4.2.3
+- r-reticulate=1.36.0
 - rescript=2024.5.0.dev0+3.g6e87cfe
-- scikit-bio=0.5.8
-- scikit-learn=0.24.1
-- scipy=1.10.0
-- seaborn=0.12.2
-- unifrac-binaries=1.3.2
+- scikit-bio=0.6.0
+- scikit-learn=1.4.2
+- scipy=1.13.0
+- seaborn=0.13.2
+- unifrac-binaries=1.4
 - unifrac=1.3
 extras:
   variant_override: