lgragert / nn-sero-pytorch Public

PyTorch version of neural network HLA serology prediction

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 107 Commits
RSNNS_fixed		RSNNS_fixed
aa-matching		aa-matching
comparison		comparison
full_frames		full_frames
indiv-scripts		indiv-scripts
models		models
old-predictions		old-predictions
old_sets		old_sets
outframe		outframe
park		park
pat_new		pat_new
pat_old		pat_old
predictions		predictions
randomforest		randomforest
rel_dna_ser		rel_dna_ser
ser		ser
testing		testing
training		training
.gitattributes		.gitattributes
.gitignore		.gitignore
A_diff.csv		A_diff.csv
B_diff.csv		B_diff.csv
C_diff.csv		C_diff.csv
DPB1_diff.csv		DPB1_diff.csv
DQB1_diff.csv		DQB1_diff.csv
DRB1_diff.csv		DRB1_diff.csv
README.md		README.md
RSNNS_prep_pipeline.py		RSNNS_prep_pipeline.py
check_ser.py		check_ser.py
compare.py		compare.py
concordance.xlsx		concordance.xlsx
metrics.py		metrics.py
nn-sero-fastai.ipynb		nn-sero-fastai.ipynb
nn-sero-fastai.py		nn-sero-fastai.py
nn-sero-qb2.py		nn-sero-qb2.py
nn_sero_cypress.py		nn_sero_cypress.py
nn_sero_pbs.sh		nn_sero_pbs.sh
nn_serology.py		nn_serology.py
parse.py		parse.py
preprocess.py		preprocess.py
random_forest.py		random_forest.py
rf_sero.ipynb		rf_sero.ipynb
ser_parse.py		ser_parse.py
summarize_pred.py		summarize_pred.py
test.ipynb		test.ipynb
test.py		test.py