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Optimize minimal canonical encoding functions #196

Optimize minimal canonical encoding functions

Optimize minimal canonical encoding functions #196

Triggered via push August 23, 2024 15:08
Status Failure
Total duration 6h 0m 18s
Artifacts 67

ci.yaml

on: push
Matrix: ci
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34 errors and 52 warnings
ci (macos-12, apple)
Process completed with exit code 2.
ci (ubuntu-20.04, gcc-7): lib/genesis/sequence/kmer/canonical_encoding.hpp#L354
assuming signed overflow does not occur when assuming that (X + c) >= X is always true [-Werror=strict-overflow]
ci (ubuntu-20.04, gcc-7): lib/genesis/sequence/kmer/canonical_encoding.hpp#L354
assuming signed overflow does not occur when assuming that (X + c) >= X is always true [-Werror=strict-overflow]
ci (ubuntu-20.04, gcc-7): lib/genesis/sequence/kmer/canonical_encoding.hpp#L354
assuming signed overflow does not occur when assuming that (X + c) >= X is always true [-Werror=strict-overflow]
ci (ubuntu-20.04, gcc-7): lib/genesis/sequence/kmer/canonical_encoding.hpp#L354
assuming signed overflow does not occur when assuming that (X + c) >= X is always true [-Werror=strict-overflow]
ci (ubuntu-20.04, gcc-7)
Process completed with exit code 2.
ci (macos-latest, apple, OFF)
Process completed with exit code 2.
ci (macos-latest, apple, RELEASE)
Process completed with exit code 2.
ci (macos-latest, gcc, OFF)
Process completed with exit code 2.
ci (macos-12, llvm-13): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-12, llvm-13)
Process completed with exit code 2.
ci (macos-latest, gcc, DEBUG, ON)
Process completed with exit code 2.
ci (macos-14, apple)
Process completed with exit code 2.
ci (macos-12, llvm-12): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-12, llvm-12)
Process completed with exit code 2.
ci (macos-13, apple)
Process completed with exit code 2.
ci (macos-12, llvm-15): lib/genesis/sequence/kmer/bitfield.hpp#L126
static assertion expression is not an integral constant expression
ci (macos-12, llvm-15)
Process completed with exit code 2.
ci (macos-12, llvm-14): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-12, llvm-14)
Process completed with exit code 2.
ci (macos-13, llvm-12): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-13, llvm-12)
Process completed with exit code 2.
ci (macos-13, llvm-13): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-13, llvm-13)
Process completed with exit code 2.
ci (macos-13, llvm-15): lib/genesis/sequence/kmer/bitfield.hpp#L126
static assertion expression is not an integral constant expression
ci (macos-13, llvm-15)
Process completed with exit code 2.
ci (macos-13, llvm-14): lib/genesis/sequence/kmer/bitfield.hpp#L126
static_assert expression is not an integral constant expression
ci (macos-13, llvm-14)
Process completed with exit code 2.
ci (macos-latest, gcc, RELEASE)
Process completed with exit code 2.
ci (macos-latest, llvm, RELEASE)
Process completed with exit code 2.
ci (macos-latest, llvm, OFF)
Process completed with exit code 2.
ci (macos-latest, llvm, DEBUG, ON)
Process completed with exit code 2.
ci (ubuntu-20.04, llvm-7)
The job running on runner GitHub Actions 21 has exceeded the maximum execution time of 360 minutes.
ci (ubuntu-20.04, llvm-7)
The operation was canceled.
ci (macos-12, apple)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag.
ci (macos-12, apple)
cmake 3.30.2 is already installed and up-to-date. To reinstall 3.30.2, run: brew reinstall cmake
ci (macos-12, apple)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, apple)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-12, gcc-10)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, gcc-10)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-12, gcc-14)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, gcc-14)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-12, gcc-14)
gcc 14.1.0_2 is already installed and up-to-date. To reinstall 14.1.0_2, run: brew reinstall gcc
ci (macos-12, gcc-12)
gcc@12 12.4.0 is already installed and up-to-date. To reinstall 12.4.0, run: brew reinstall gcc@12
ci (macos-12, gcc-12)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, gcc-12)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-latest, apple, OFF)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag.
ci (macos-latest, apple, OFF)
cmake 3.30.2 is already installed and up-to-date. To reinstall 3.30.2, run: brew reinstall cmake
ci (macos-latest, apple, OFF)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.
ci (macos-12, gcc-9)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, gcc-9)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-latest, apple, RELEASE)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag.
ci (macos-latest, apple, RELEASE)
cmake 3.30.2 is already installed and up-to-date. To reinstall 3.30.2, run: brew reinstall cmake
ci (macos-latest, gcc, OFF)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.
ci (macos-12, gcc-11)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, gcc-11)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-12, llvm-13)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, llvm-13)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (ubuntu-20.04, llvm-8)
Falling back to LLVM version 17.0.6 -ubuntu-22.04 for the Ubuntu.
ci (macos-14, apple)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag.
ci (macos-14, apple)
cmake 3.30.2 is already installed and up-to-date. To reinstall 3.30.2, run: brew reinstall cmake
ci (macos-12, llvm-12)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, llvm-12)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-13, apple)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, apple)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag.
ci (macos-13, apple)
cmake 3.30.2 is already installed and up-to-date. To reinstall 3.30.2, run: brew reinstall cmake
ci (ubuntu-22.04, llvm-8)
Falling back to LLVM version 17.0.6 -ubuntu-22.04 for the Ubuntu.
ci (macos-12, llvm-15)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, llvm-15)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (macos-12, llvm-14)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-12, llvm-14)
libomp 18.1.8 is already installed and up-to-date. To reinstall 18.1.8, run: brew reinstall libomp
ci (ubuntu-latest, llvm, OFF)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.
ci (macos-13, llvm-12)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-10)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-11)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-14)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-14)
gcc 14.1.0_2 is already installed and up-to-date. To reinstall 14.1.0_2, run: brew reinstall gcc
ci (ubuntu-latest, gcc, OFF)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.
ci (macos-13, llvm-13)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-12)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, gcc-12)
gcc@12 12.4.0 is already installed and up-to-date. To reinstall 12.4.0, run: brew reinstall gcc@12
ci (macos-13, llvm-15)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-13, llvm-14)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (macos-latest, llvm, OFF)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.
ci (macos-13, gcc-9)
autoconf 2.72 is already installed and up-to-date. To reinstall 2.72, run: brew reinstall autoconf
ci (ubuntu-20.04, llvm-7)
No files were found with the provided path: ./build/**/*.log ./test/out. No artifacts will be uploaded.

Artifacts

Produced during runtime
Name Size
logs-macos-12-apple--htslib-
8.74 KB
logs-macos-12-gcc-10--htslib-
9.22 KB
logs-macos-12-gcc-11--htslib-
9.24 KB
logs-macos-12-gcc-12--htslib-
9.23 KB
logs-macos-12-gcc-14--htslib-
9.25 KB
logs-macos-12-gcc-9--htslib-
9.2 KB
logs-macos-12-llvm-12--htslib-
9.08 KB
logs-macos-12-llvm-13--htslib-
9.08 KB
logs-macos-12-llvm-14--htslib-
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logs-macos-12-llvm-15--htslib-
9.28 KB
logs-macos-13-apple--htslib-
8.85 KB
logs-macos-13-gcc-10--htslib-
9.21 KB
logs-macos-13-gcc-11--htslib-
9.24 KB
logs-macos-13-gcc-12--htslib-
9.24 KB
logs-macos-13-gcc-14--htslib-
9.24 KB
logs-macos-13-gcc-9--htslib-
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logs-macos-13-llvm-12--htslib-
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logs-macos-13-llvm-13--htslib-
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logs-macos-13-llvm-14--htslib-
9.24 KB
logs-macos-13-llvm-15--htslib-
9.37 KB
logs-macos-14-apple--htslib-
10.1 KB
logs-macos-latest-apple-RELEASE-htslib-
10.1 KB
logs-macos-latest-gcc-DEBUG-htslib-ON
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logs-macos-latest-gcc-RELEASE-htslib-
9.99 KB
logs-macos-latest-llvm-DEBUG-htslib-ON
10.1 KB
logs-macos-latest-llvm-RELEASE-htslib-
10.1 KB
logs-ubuntu-20.04-gcc-10--htslib-
8.86 KB
logs-ubuntu-20.04-gcc-13--htslib-
8.71 KB
logs-ubuntu-20.04-gcc-7--htslib-
8.65 KB
logs-ubuntu-20.04-gcc-8--htslib-
8.65 KB
logs-ubuntu-20.04-gcc-9--htslib-
8.75 KB
logs-ubuntu-20.04-llvm-10--htslib-
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logs-ubuntu-20.04-llvm-11--htslib-
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logs-ubuntu-20.04-llvm-12--htslib-
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logs-ubuntu-20.04-llvm-13--htslib-
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logs-ubuntu-20.04-llvm-14--htslib-
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logs-ubuntu-20.04-llvm-15--htslib-
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logs-ubuntu-20.04-llvm-17--htslib-
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logs-ubuntu-20.04-llvm-6--htslib-
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logs-ubuntu-20.04-llvm-8--htslib-
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logs-ubuntu-22.04-gcc-10--htslib-
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logs-ubuntu-22.04-gcc-11--htslib-
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logs-ubuntu-22.04-gcc-12--htslib-
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logs-ubuntu-22.04-gcc-13--htslib-
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logs-ubuntu-22.04-gcc-9--htslib-
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logs-ubuntu-22.04-llvm-10--htslib-
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logs-ubuntu-22.04-llvm-11--htslib-
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logs-ubuntu-22.04-llvm-12--htslib-
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logs-ubuntu-22.04-llvm-13--htslib-
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logs-ubuntu-22.04-llvm-14--htslib-
8.45 KB
logs-ubuntu-22.04-llvm-15--htslib-
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logs-ubuntu-22.04-llvm-16--htslib-
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logs-ubuntu-22.04-llvm-17--htslib-
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logs-ubuntu-22.04-llvm-6--htslib-
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logs-ubuntu-22.04-llvm-7--htslib-
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logs-ubuntu-22.04-llvm-8--htslib-
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logs-ubuntu-24.04-gcc-10--htslib-
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logs-ubuntu-24.04-gcc-11--htslib-
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logs-ubuntu-24.04-gcc-12--htslib-
8.79 KB
logs-ubuntu-24.04-gcc-13--htslib-
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logs-ubuntu-24.04-gcc-14--htslib-
8.87 KB
logs-ubuntu-24.04-gcc-9--htslib-
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logs-ubuntu-24.04-llvm-18--htslib-
8.64 KB
logs-ubuntu-latest-gcc-DEBUG-htslib-ON
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logs-ubuntu-latest-gcc-RELEASE-htslib-
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logs-ubuntu-latest-llvm-DEBUG-htslib-ON
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logs-ubuntu-latest-llvm-RELEASE-htslib-
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