Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Auto Update Modules [27 September 2024, 11:03] #738

Merged
merged 1 commit into from
Sep 27, 2024
Merged

Auto Update Modules [27 September 2024, 11:03] #738

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
View file
Open in desktop

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
View file
Open in desktop

Large diffs are not rendered by default.

24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/CUDA-Python.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

CUDA-Python
===========

# Available modules


The overview below shows which CUDA-Python installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using CUDA-Python, load one of these modules using a `module load` command like:

```shell
module load CUDA-Python/12.1.0-gfbf-2023a-CUDA-12.1.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|CUDA-Python/12.1.0-gfbf-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/FLUENT.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ module load FLUENT/2024R2

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|FLUENT/2024R2|-|-|x|-|x|x|-|
|FLUENT/2024R2|x|x|x|x|x|x|x|
|FLUENT/2024R1|x|x|x|x|x|-|x|
|FLUENT/2023R1|x|x|x|x|x|-|x|
|FLUENT/2022R1|-|x|x|-|x|-|x|
Expand Down
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/HTSplotter.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which HTSplotter installations are available per HPC-UG
To start using HTSplotter, load one of these modules using a `module load` command like:

```shell
module load HTSplotter/2.11-foss-2022b
module load HTSplotter/2.11-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|HTSplotter/2.11-foss-2023a|x|x|x|x|x|x|x|
|HTSplotter/2.11-foss-2022b|x|x|x|x|x|-|x|
|HTSplotter/0.15-foss-2022a|x|x|x|x|x|-|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/ISA-L.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ module load ISA-L/2.31.0-GCCcore-13.2.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ISA-L/2.31.0-GCCcore-13.2.0|x|x|x|-|x|x|x|
|ISA-L/2.31.0-GCCcore-13.2.0|x|x|x|x|x|x|x|
|ISA-L/2.30.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
|ISA-L/2.30.0-GCCcore-11.3.0|x|x|x|x|x|-|x|
|ISA-L/2.30.0-GCCcore-11.2.0|x|x|x|-|x|-|x|
Expand Down
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/SSW.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which SSW installations are available per HPC-UGent Tie
To start using SSW, load one of these modules using a `module load` command like:

```shell
module load SSW/1.1-GCCcore-10.2.0
module load SSW/1.1-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|SSW/1.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
|SSW/1.1-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/SeqLib.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which SeqLib installations are available per HPC-UGent
To start using SeqLib, load one of these modules using a `module load` command like:

```shell
module load SeqLib/1.2.0-GCC-10.2.0
module load SeqLib/1.2.0-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|SeqLib/1.2.0-GCC-12.3.0|x|x|x|x|x|x|x|
|SeqLib/1.2.0-GCC-10.2.0|-|x|x|-|x|-|-|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/VCFtools.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,4 +22,5 @@ module load VCFtools/0.1.16-iccifort-2019.5.281
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|VCFtools/0.1.16-iccifort-2019.5.281|-|x|x|-|x|-|x|
|VCFtools/0.1.16-GCC-12.3.0|x|x|x|x|x|x|x|
|VCFtools/0.1.16-GCC-10.2.0|-|x|x|-|x|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/WFA2.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which WFA2 installations are available per HPC-UGent Ti
To start using WFA2, load one of these modules using a `module load` command like:

```shell
module load WFA2/2.3.3-GCCcore-11.3.0
module load WFA2/2.3.4-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|WFA2/2.3.4-GCCcore-12.3.0|x|x|x|x|x|x|x|
|WFA2/2.3.3-GCCcore-11.3.0|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/code-cli.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which code-cli installations are available per HPC-UGen
To start using code-cli, load one of these modules using a `module load` command like:

```shell
module load code-cli/1.85.1-x64
module load code-cli/1.93.1-x64
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|code-cli/1.93.1-x64|x|x|x|x|x|x|x|
|code-cli/1.85.1-x64|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/code-server.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which code-server installations are available per HPC-U
To start using code-server, load one of these modules using a `module load` command like:

```shell
module load code-server/4.9.1
module load code-server/4.93.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|code-server/4.93.1|x|x|x|x|x|x|x|
|code-server/4.9.1|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fastahack.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which fastahack installations are available per HPC-UGe
To start using fastahack, load one of these modules using a `module load` command like:

```shell
module load fastahack/1.0.0-GCCcore-11.3.0
module load fastahack/1.0.0-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fastahack/1.0.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fastahack/1.0.0-GCCcore-11.3.0|x|x|x|x|x|-|x|
|fastahack/1.0.0-GCCcore-10.2.0|-|x|x|-|x|-|x|
4 changes: 2 additions & 2 deletions mkdocs/docs/HPC/only/gent/available_software/detail/fastp.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,8 +21,8 @@ module load fastp/0.23.4-GCC-13.2.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fastp/0.23.4-GCC-13.2.0|x|x|x|-|x|x|x|
|fastp/0.23.4-GCC-12.3.0|x|x|x|-|x|x|x|
|fastp/0.23.4-GCC-13.2.0|x|x|x|x|x|x|x|
|fastp/0.23.4-GCC-12.3.0|x|x|x|x|x|x|x|
|fastp/0.23.2-GCC-11.2.0|x|x|x|-|x|-|x|
|fastp/0.20.1-iccifort-2020.1.217|-|x|x|-|x|-|-|
|fastp/0.20.0-iccifort-2019.5.281|-|x|-|-|-|-|-|
Expand Down
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fermi-lite.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which fermi-lite installations are available per HPC-UG
To start using fermi-lite, load one of these modules using a `module load` command like:

```shell
module load fermi-lite/20190320-GCCcore-10.2.0
module load fermi-lite/20190320-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fermi-lite/20190320-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fermi-lite/20190320-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/filevercmp.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which filevercmp installations are available per HPC-UG
To start using filevercmp, load one of these modules using a `module load` command like:

```shell
module load filevercmp/20191210-GCCcore-11.3.0
module load filevercmp/20191210-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|filevercmp/20191210-GCCcore-12.3.0|x|x|x|x|x|x|x|
|filevercmp/20191210-GCCcore-11.3.0|x|x|x|x|x|-|x|
|filevercmp/20191210-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/freebayes.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which freebayes installations are available per HPC-UGe
To start using freebayes, load one of these modules using a `module load` command like:

```shell
module load freebayes/1.3.5-GCC-10.2.0
module load freebayes/1.3.7-gfbf-2023a-R-4.3.2
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|freebayes/1.3.7-gfbf-2023a-R-4.3.2|x|x|x|x|x|x|x|
|freebayes/1.3.5-GCC-10.2.0|-|x|x|-|x|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fsom.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which fsom installations are available per HPC-UGent Ti
To start using fsom, load one of these modules using a `module load` command like:

```shell
module load fsom/20151117-GCCcore-11.3.0
module load fsom/20151117-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fsom/20151117-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fsom/20151117-GCCcore-11.3.0|x|x|x|x|x|-|x|
|fsom/20141119-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/intervaltree.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which intervaltree installations are available per HPC-
To start using intervaltree, load one of these modules using a `module load` command like:

```shell
module load intervaltree/0.1-GCCcore-11.3.0
module load intervaltree/0.1-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|intervaltree/0.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
|intervaltree/0.1-GCCcore-11.3.0|x|x|x|x|x|-|x|
|intervaltree/0.1-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/multichoose.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which multichoose installations are available per HPC-U
To start using multichoose, load one of these modules using a `module load` command like:

```shell
module load multichoose/1.0.3-GCCcore-11.3.0
module load multichoose/1.0.3-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|multichoose/1.0.3-GCCcore-12.3.0|x|x|x|x|x|x|x|
|multichoose/1.0.3-GCCcore-11.3.0|x|x|x|x|x|-|x|
|multichoose/1.0.3-GCCcore-10.2.0|-|x|x|-|x|-|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/ont-remora.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

ont-remora
==========

# Available modules


The overview below shows which ont-remora installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using ont-remora, load one of these modules using a `module load` command like:

```shell
module load ont-remora/3.3.0-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ont-remora/3.3.0-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/smithwaterman.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which smithwaterman installations are available per HPC
To start using smithwaterman, load one of these modules using a `module load` command like:

```shell
module load smithwaterman/20160702-GCCcore-11.3.0
module load smithwaterman/20160702-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|smithwaterman/20160702-GCCcore-12.3.0|x|x|x|x|x|x|x|
|smithwaterman/20160702-GCCcore-11.3.0|x|x|x|x|x|-|x|
|smithwaterman/20160702-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/tabixpp.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which tabixpp installations are available per HPC-UGent
To start using tabixpp, load one of these modules using a `module load` command like:

```shell
module load tabixpp/1.1.2-GCC-11.3.0
module load tabixpp/1.1.2-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|tabixpp/1.1.2-GCC-12.3.0|x|x|x|x|x|x|x|
|tabixpp/1.1.2-GCC-11.3.0|x|x|x|x|x|-|x|
|tabixpp/1.1.0-GCC-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/vcflib.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which vcflib installations are available per HPC-UGent
To start using vcflib, load one of these modules using a `module load` command like:

```shell
module load vcflib/1.0.9-foss-2022a-R-4.2.1
module load vcflib/1.0.9-gfbf-2023a-R-4.3.2
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|vcflib/1.0.9-gfbf-2023a-R-4.3.2|x|x|x|x|x|x|x|
|vcflib/1.0.9-foss-2022a-R-4.2.1|x|x|x|x|x|-|x|
|vcflib/1.0.2-GCC-10.2.0|-|x|x|-|x|-|x|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar07.gastly.os
altloginhost: gligar08.gastly.os
modules_last_updated: Wed, 25 Sep 2024 at 11:04:20 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Fri, 27 Sep 2024 at 11:04:20 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
Expand Down
Loading