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DEP: you know what i don't even think we need cython #10

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DEP: you know what i don't even think we need cython

DEP: you know what i don't even think we need cython #10

Workflow file for this run

.github/workflows/main.yml at da42722
# Based on
# https://github.com/fedarko/strainFlye/blob/main/.github/workflows/main.yml,
# which was in turn "[based] roughly on the main.yml and standalone.yml
# workflows in
# https://github.com/biocore/empress/blob/master/.github/workflows/,
# and on https://docs.github.com/en/actions/quickstart". It's copy-and-paste
# all the way down baybee
name: wotplot CI
on: [push, pull_request]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.6", "3.7", "3.8", "3.9", "3.10", "3.11"]
steps:
# Updating from v2 to v3 to match, as of writing,
# https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
- name: Check out code
uses: actions/checkout@v3
# Set up a conda env using mamba (which is much faster than conda).
# We can use "create-args" to adjust the python version; based on
# https://github.com/mamba-org/setup-micromamba/issues/51#issue-1688507017
- name: Install conda dependencies
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment.yml
create-args: python=${{ matrix.python-version }}
init-shell: bash
- name: Sanity check echo python version
run: python --version
shell: bash
- name: Sanity check echo python location
run: which python
shell: bash
- name: Sanity check echo pip version
run: pip --version
shell: bash
- name: Sanity check echo pip location
run: which pip
shell: bash
- name: Install wotplot (and pip dependencies)
run: pip install -e .[dev,viz]
shell: bash
- name: Lint and stylecheck
run: make stylecheck
shell: bash
- name: Run tests
run: make test
shell: bash
- name: Upload code coverage information to Codecov
uses: codecov/codecov-action@v2