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Merge pull request #47 from coecms/create_analysis3_2307 #46

Merge pull request #47 from coecms/create_analysis3_2307

Merge pull request #47 from coecms/create_analysis3_2307 #46

Workflow file for this run

name: Deploy conda env
on:
push:
branches: main
jobs:
deploy:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
### Latest at time of writing
uses: actions/checkout@v3.3.0
- name: Sync repository to Gadi
### Latest at time of writing
uses: up9cloud/action-rsync@v1.3
env:
HOST: gadi.nci.org.au
TARGET: ${{secrets.GADI_REPO_PATH}}
KEY: ${{secrets.DEPLOY_KEY}}
USER: ${{secrets.GADI_USER}}
- name: Deploy conda environment
uses: appleboy/ssh-action@v0.1.7
with:
host: gadi.nci.org.au
username: ${{secrets.GADI_USER}}
key: ${{secrets.DEPLOY_KEY}}
script: |
export SCRIPT_DIR=${{secrets.GADI_REPO_PATH}}/scripts
eval $( grep ADMIN_DIR $SCRIPT_DIR/install_config.sh )
eval $( grep BUILD_STAGE_DIR $SCRIPT_DIR/install_config.sh )
"${SCRIPT_DIR}"/deploy.sh