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cicd: update elastic beanstalk commands #280

Merged
merged 51 commits into from
Mar 28, 2024
Merged

cicd: update elastic beanstalk commands #280

merged 51 commits into from
Mar 28, 2024

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korikuzma
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Closes #238 . Will open once #279 is merged

  • switch to using python 3.11, cool-seq-tool, and p7zip

* Update database nodes and relationships
  * Dropped Variation Group. We can add back in new issue if we want to retain this
* Update versions for disease-normalizer, civicpy, pydantic, and neo4j 
* Changed fixture scope in `tests/conftest.py` to `session`
* fix: typo in CODING_KEYS
* change: study now has alleleOrigin property with HAS_GENE_CONTEXT rel
* use python 3.11
* use cool-seq-tool
@korikuzma korikuzma added priority:medium Medium priority ci/cd Continuous integration and continuous delivery/deployment changes labels Jan 8, 2024
@korikuzma korikuzma self-assigned this Jan 8, 2024
Base automatically changed from issue-273 to epic-231 March 28, 2024 13:03
@korikuzma korikuzma marked this pull request as ready for review March 28, 2024 13:04
@jsstevenson jsstevenson self-requested a review March 28, 2024 15:56
@korikuzma korikuzma merged commit d0495bf into epic-231 Mar 28, 2024
@korikuzma korikuzma deleted the issue-238 branch March 28, 2024 16:03
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2 participants