0.4.0

What's Changed

• React refactor UI v2 by @cjosu in #46
• Issue 49 by @cjosu in #51
• Issue 23 by @jsstevenson in #31
• Issue 55 tmp by @korikuzma in #74
• fix: demo data by @korikuzma in #100
• Layout fixes and cleanup by @katiestahl in #103
• removing unused variables, changing key of droppable to unique id to … by @katiestahl in #104
• Change fusion type to mode by @katiestahl in #111
• fix: align default port numbering by @jsstevenson in #113
• test: resolve server-side regressions by @jsstevenson in #114
• adding optional chaining to fix error reading undefined attributes by @katiestahl in #116
• fix: handle tx seg input edge cases by @jsstevenson in #120
• Landing page, menu, and theme changes by @katiestahl in #123
• feat: latest manuscript updates -- demo data, regulatory elements by @jsstevenson in #124
• fix: misc gene autocomplete issues by @jsstevenson in #129
• Summary by @jsstevenson in #131
• the last 8 months of changes by @jsstevenson in #98
• fix: get deploy working again by @jsstevenson in #136
• Make demo data dropdown by @katiestahl in #137
• adding delay to gene lookup after a user types in autocomplete by @katiestahl in #141
• feat: add working sequence ID page by @jsstevenson in #143
• upgrading react-scripts to v5 to fix yarn hot reload error by @katiestahl in #146
• Fix utilities styling by @katiestahl in #147
• Update styling on structure page by @katiestahl in #142
• ci: add dev deployment scripts by @jsstevenson in #148
• ci: update deploy lockfile by @jsstevenson in #149
• Staging by @jsstevenson in #150
• adding description and title by @katiestahl in #151
• Staging by @katiestahl in #152
• Fix drag and drop options by @katiestahl in #153
• Staging by @katiestahl in #154
• feat: add sequence ID demo buttons by @jsstevenson in #155
• fix: don't load summary error before checking validity by @jsstevenson in #157
• ci: quicker dev terminate time by @jsstevenson in #159
• Staging by @jsstevenson in #160
• refactor: remove aws env vars by @korikuzma in #163
• updating fusor version, adjusting uta tools to the new naming (cool-s… by @katiestahl in #162
• Staging by @katiestahl in #164
• fix: requirements.txt for elastic beanstalk by @korikuzma in #165
• applying background color to body and removing height from app html t… by @katiestahl in #178
• adjusting min height on tab panel so navigation buttons always appear… by @katiestahl in #175
• fix: label concept ID matches in gene autocomplete by @jsstevenson in #180
• feat: tooltips, help menus, general useability by @jsstevenson in #172
• feat: better validation error messages by @jsstevenson in #179
• fix: make backend tests pass by @jsstevenson in #183
• feat: more forgiving ID parsing by @jsstevenson in #185
• fix: reg element display properties in examples by @jsstevenson in #187
• feat: add version # to app drawer by @jsstevenson in #184
• Move regulatory element to structure page by @katiestahl in #188
• Staging by @katiestahl in #192
• feat: API cleanup by @jsstevenson in #186
• fix: correct request path in prod by @jsstevenson in #194
• Staging by @jsstevenson in #195
• refactoring and updating branding colors to match VICC site by @katiestahl in #201
• Staging by @katiestahl in #202
• fix: correct accession descriptions by @jsstevenson in #205
• fix: correct accession descriptions (#205) by @jsstevenson in #206
• fix: update build commands for python 3.11 by @jsstevenson in #208
• fix: update build commands for python 3.11 (#208) by @jsstevenson in #209
• Revert "fix: update build commands for python 3.11" by @jsstevenson in #210
• Staging by @jsstevenson in #211
• Revert "Revert "fix: update build commands for python 3.11"" by @jsstevenson in #212
• Staging by @jsstevenson in #213
• build: require latest FUSOR release by @jsstevenson in #214
• fix: clean up utils requests by @jsstevenson in #217
• build: fix deployment issues by @jsstevenson in #219
• UI bug fixes by @katiestahl in #229
• fix: fixing ui issues such as incorrect displays and readability issues by @katiestahl in #231
• cicd: fix Elastic Beanstalk deployment by @jsstevenson in #235
• cicd: update sc_product_id by @korikuzma in #237
• cicd: update sc_product_id by @korikuzma in #238
• fix: pin latest FUSOR to remove ID prefixes from nomenclature by @jsstevenson in #239
• Staging by @jsstevenson in #241
• Merge pull request #241 from cancervariants/staging by @jsstevenson in #242
• fix: include reg element nomenclature in preview by @jsstevenson in #247
• Staging by @jsstevenson in #249
• fix: display error for out-of-range exons by @jsstevenson in #246
• build: use latest FUSOR prerelease by @jsstevenson in #258
• feat: optionally enable tooltips by @jsstevenson in #248
• style: use Ruff and Black by @jsstevenson in #259
• fix: adding validation to disallow same-gene fusions by @katiestahl in #251
• fix: adding validation to disallow same-gene fusions (#251) by @katiestahl in #263
• Issue 256 by @katiestahl in #260
• Autocomplete updates by @jsstevenson in #245
• merge main into staging by @katiestahl in #266
• feat: relax requirements on minimum information model components for … by @katiestahl in #264
• bugfix: removing identifier in front of chromosome on auto populate by @katiestahl in #268
• docs: update API doc organization by @jsstevenson in #269
• cicd: update github workflows/templates by @jsstevenson in #284
• cicd: update precommit by @jsstevenson in #286
• build!: define in pyproject.toml by @jsstevenson in #285
• cicd: fix stalebot by @jsstevenson in #287
• Staging by @jsstevenson in #288

New Contributors

• @cjosu made their first contribution in #46
• @katiestahl made their first contribution in #103

Full Changelog: v0.0.1...0.4.0