fix: transcript lookup

client/src/services/ResponseModels.ts

@@ -760,6 +760,13 @@ export interface GetDomainResponse {
   warnings?: string[] | null;
   domain: FunctionalDomain | null;
 }
+/**
+ * Response model for MANE transcript retrieval endpoint.
+ */
+export interface GetGeneTranscriptsResponse {
+  warnings?: string[] | null;
+  transcripts?: string[];
+}
 /**
  * Response model for MANE transcript retrieval endpoint.
  */

server/src/curfu/routers/utilities.py

@@ -65,7 +65,7 @@ async def get_transcripts_for_gene(request: Request, gene: str) -> dict:
     :return: Dict containing transcripts if lookup succeeds, or warnings upon failure
     """
     normalized = request.app.state.fusor.gene_normalizer.normalize(gene)
-    symbol = normalized.gene_descriptor.label
+    symbol = normalized.gene.label
     transcripts = await request.app.state.fusor.cool_seq_tool.uta_db.get_transcripts(
         gene=symbol
     )

server/src/curfu/schemas.py

@@ -250,6 +250,12 @@ class GetTranscriptsResponse(Response):
     transcripts: list[ManeGeneTranscript] | None
 
 
+class GetGeneTranscriptsResponse(Response):
+    """Response model for MANE transcript retrieval endpoint."""
+
+    transcripts: list[str] = None
+
+
 class ServiceInfoResponse(Response):
     """Response model for service_info endpoint."""