v1.0.2

Removing trove classifier to hide plugin from napari

What's Changed

• Remove napari trove classifier by @adamltyson in #183

Full Changelog: v1.0.1...v1.0.2

v1.0.1

Patch to update visibility on the napari hub

What's Changed

• Add visibility flag to remove listing from napari hub by @adamltyson in #182

Full Changelog: v1.0.0...v1.0.1

v1.0.0

Mark package as deprecated

As part of our upcoming release of version 1 of BrainGlobe, the cellfinder-core and cellfinder-napari packages are merging into a single, unified, cellfinder package. You can read about this in our blog post.

As such, this will be the final release of a standalone cellfinder-napari package. If you want to continue using the plugin, we recommend you follow the steps outlined in the blog post above, or head over to cellfinder and install version >=v1.0.0 in a clean environment.

What's Changed

• Set pre-commit autoupdate frequency to monthly by @adamltyson in #172
• Delete .github/workflows/plugin_preview.yml by @adamltyson in #175
• Force headless display by @willGraham01 in #178
• Prepare for retirement by @willGraham01 in #177

Full Changelog: v0.1.0...v1.0.0

Stable release for brainglobe-meta

What's Changed

• Add categories and preview page workflow for the napari hub by @neuromusic in #30
• Migrate to napari plugin engine 2 by @alessandrofelder in #33
• improve tooltip by @alessandrofelder in #50
• include missing YAML files in sdist by @alessandrofelder in #51
• Run pre-commit and fix besides mypy by @paddyroddy in #60
• Expand pre commit checks and add ci by @paddyroddy in #58
• Move badges by @paddyroddy in #61
• Merge main into reformat-structure branch by @paddyroddy in #64
• Integrate linting into CI and ensure later steps depend on it by @paddyroddy in #66
• Attempt at modularising/improving code legibility by @alessandrofelder in #54
• Fix mypy now that the refactor PR has been merged by @paddyroddy in #68
• Add checkbox to use pre-trained weights by @dstansby in #70
• Raise error box if no images specified by @dstansby in #69
• Add a progress bar for detection by @dstansby in #73
• Update codecov action to v2 by @dstansby in #78
• correct voxel size y default by @alessandrofelder in #81
• Add scroll bars to widget by @dstansby in #79
• Add a basic widget test by @dstansby in #82
• Bump pre-commit black version to fix pre-commit by @dstansby in #89
• Update QT setup on github actions by @dstansby in #90
• Add sample data as plugin by @dstansby in #85
• Move detection files to sub-folder by @dstansby in #91
• Add more docstrings and typing by @dstansby in #93
• Use BrainGlobe composite actions to run tests by @dstansby in #94
• Add signature typing to curation.py by @dstansby in #101
• Use napari show_info to communicate messages to users by @dstansby in #100
• Add smoke test for curation widget by @dstansby in #102
• Drop Python 3.7 tests, add 3.9 tests by @dstansby in #104
• Add simple smoke test for the main worker by @dstansby in #92
• Update development dependencies by @dstansby in #107
• Test adding new training layers for cell curation by @dstansby in #105
• Test adding cells and non-cells during curation. by @dstansby in #106
• Cube extraction test by @dstansby in #109
• Speed up detection test by @dstansby in #110
• Remove old plugin engine v1 file by @dstansby in #111
• De-duplicate widget header by @dstansby in #113
• Add example to load napari and show detection sample data/widget by @dstansby in #114
• Add progress bar when saving curated cells by @dstansby in #103
• Modularise training widget inputs by @alessandrofelder in #121
• Bump2version fix whitespace by @paddyroddy in #123
• Propagate errors from the worker to main thread by @dstansby in #125
• Give the user more feedback when running detection by @dstansby in #126
• Expand training tests by @alessandrofelder in #128
• Use official scrollable widget by @adamltyson in #136
• Update requirements by @adamltyson in #143
• Remove patch version of plugin preview action by @adamltyson in #144
• Update .pre-commit-config.yaml by @adamltyson in #145
• Fix tests by @dstansby in #149
• Use standard pre-commit config by @dstansby in #150
• Update yaml filter by @adamltyson in #152
• Use pyproject by @dstansby in #151
• Update README.md by @adamltyson in #154
• Update links by @adamltyson in #156
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #158
• Update dependency (imlib -> brainglobe-utils) by @adamltyson in #159
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #160
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #161
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #162
• Update links by @adamltyson in #163
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #164
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #165
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #166
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #167
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #169
• Update CI deployment to use NI unit actions by @willGraham01 in #168

New Contributors

• @neuromusic made their first contribution in #30
• @alessandrofelder made their first contribution in #33
• @paddyroddy made their first contribution in #60
• @dstansby made their first contribution in #70
• @pre-commit-ci made their first contribution in #158
• @willGraham01 made their first contribution in #168

Full Changelog: 0.0.15...v0.1.0