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1. Causal_Microbiome_Tutorial Causal_Microbiome_Tutorial Public

   Causal inference framework for environment-microbiome data applied to American Gut data.

   R 6 2

2. c-lasso c-lasso Public

   Forked from Leo-Simpson/c-lasso

   c-lasso: a Python package for constrained sparse regression and classification

   HTML

3. NetCoMi NetCoMi Public

   Forked from stefpeschel/NetCoMi

   Network Comparison for Microbial Compositional Data

   R

4. tascCODA tascCODA Public

   tree-aggregated compositional analysis for high-throughput sequencing data

   Jupyter Notebook 8

5. trac trac Public

   Forked from jacobbien/trac

   Tree-based Aggregation of Compositional Data

   R 1

6. SpiecEasi SpiecEasi Public

   Forked from zdk123/SpiecEasi

   Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

   R