Developing guides

Developing R packages in general

• http://r-pkgs.had.co.nz
• http://biometry.github.io/APES/R/R70-PackageDevelopment.html
• inst/CITATION file describing how to cite your package.

Documentation

With Roxygen II

• https://cran.r-project.org/web/packages/roxygen2/vignettes/roxygen2.html
• https://cran.r-project.org/web/packages/roxygen2/vignettes/rd.html

How to build the package in RStudio

1. Download the "PhyloSim" package from github
2. Open the PhyloSim R project file
3. Make sure the build configuration in project settings is OK, and use the build button in the upper right corner.
4. Alternative, you can build with devtools::build