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Named Entity REcognition to identify Adverse Drug Reactions, Dosage, Severity on Drug prescrptions.

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NSanjay/NER_Drug_Prescriptions

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NER_Drug_Prescriptions

A solution for the TAC 2017 - Adverse Drug Reaction Extraction from Drug Labels.

Architecture

Model implementation present in main_tf.py

  1. Glove Embeddings for words
  2. Character Embeddings
  3. 1d convolution and max pooling on Character Embeddings
  4. Bi-LSTM
  5. CRF

Data

The data files are downloaded from here

Download glove embeddings from here. Extract it inside the data folder.

Scripts

  1. annotate_data.py - Preprocess and tag data.
  2. build_vocab.py - Build the vocabulary
  3. build_glove.py - Retrieve glove embeddings for each word.

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Named Entity REcognition to identify Adverse Drug Reactions, Dosage, Severity on Drug prescrptions.

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