Releases: CanDIG/candigv2-query
Releases · CanDIG/candigv2-query
v2.3.0: Discovery queries
Highlights
- Query can assemble discovery queries
- Speedups
What's Changed
- Protect against a few null cases by @OrdiNeu in #26
- Extend timeout for queries to be 60s by @OrdiNeu in #27
- DIG-1597: primary site query fix by @mshadbolt in #29
- DIG-1372: Query can assemble discovery queries by @OrdiNeu in #28
- Use Opa Secret and update authx by @daisieh in #30
- Allow parameters with commas by switching the internal splitter to pipe-delimiters by @OrdiNeu in #32
- DIG-1616: Stop using donor-with-clinical-data endpoint for clinical data table by @OrdiNeu in #31
- Switch to using the new endpoint for genomic_completeness by @OrdiNeu in #33
Full Changelog: v2.2.0...v2.3.0
v2.2.0: Bugfixes
What's Changed
- DIG-1527: Catch error when treatment_type is null by @mshadbolt in #24
- Add summary_cases to summary_stats by @mshadbolt in #25
Full Changelog: v2.1.0...v2.2.0
v2.1.0: Clinical discovery and bugfixes
Summary of Changes
- Update versions of Alpine and Python and other dependencies
- Several fixes to make it work with the new frontend, including genomic search fixes, etc.
- Fix a miscount on donors contributing to age summary stats once per treatment
What's Changed
- Add fixes for things that changed with the Katsu UUID fix by @OrdiNeu in #6
- DIG-1149: Update Alpine to 3.18 by @daisieh in #8
- DIG-1377: Be consistent in our use of candig user inside containers by @OrdiNeu in #7
- DIG-1144: update to python 3.12 by @daisieh in #9
- Fix for the search page on query by @OrdiNeu in #12
- DIG-1382, DIG-1384: query uses a service token with htsget by @daisieh in #11
- add libffi-dev dependency by @mshadbolt in #13
- DIG-1447: Fix the miscount on donors contributing to age summary stats once per treatment by @OrdiNeu in #14
- Genomic search fix by @OrdiNeu in #15
- Add workflow file (copied from HTSGet) by @OrdiNeu in #10
- DIG-1416: Add intervals support by @OrdiNeu in #17
- Add clinical discovery queries by @OrdiNeu in #18
- DIG-1376 :Update GH Action to improve PR title and description by @mshadbolt in #19
- Bugfix: Missing data and completeness data by @OrdiNeu in #20
- Bump versions to fix Snyk vulnerabilities by @OrdiNeu in #21
- Bugfix/htsget pruning by @OrdiNeu in #22
New Contributors
- @mshadbolt made their first contribution in #13
Full Changelog: v2.0.0...v2.1.0
v2.0.0: Katsu UUIDs, completeness stats
What's Changed
- DIG-1240: API middleware service to handle queries across federated instances by @OrdiNeu in #1
- Fix to the age at diagnosis summary stat not working by @OrdiNeu in #4
- Completeness stats query by @OrdiNeu in #2
- Fix an issue where an unknown date of birth or diagnosis would fail by @OrdiNeu in #5
Full Changelog: v1.0.0...v2.0.0
v1.0.0: Initial Release
Initial release of the query microservice.