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@SooLee SooLee released this 23 Oct 03:09
· 1910 commits to master since this release
3d84e25

Tibanna unicorn now supports Simple WDL

Constraints

  • Input files must be either a singlet or an array (e.g. not an array of arrays or a dictionary, etc).
  • All outputs must be files (no streaming, string, integer etc allowed).
  • If an input file is used by multiple steps, it will be downloaded multiple times to Tibanna's AWSEM EC2 instance.
  • Secondary files are not supported. (WDL itself does not support secondary files)
  • Compared to CWL, for WDL, Tibanna does not yet parse commands into postrun.json and it also does not calculate md5sum for output files.