Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
-
Updated
Sep 21, 2024 - JavaScript
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
Utils for loading HuBMAP data formats
HuBMAP Data Portal front end
Identify the locations of each functional tissue unit (FTU) in biopsy slides from several different organs.
Semantic Segmentation to identify glomeruli in kidney images
Python utility for converting images to zarr chunked arrays
kaggle hubmap kidney segmentation code
Binary segmentation of multi organ tissue units while implementing latest vision transformer architectures
Weighted Masks Fusion (WMF) - Ensembling for Instance Segmentation.
Glomerular Segmentation of Kidney Images with U-Net
Style guide for HuBMAP Portal development.
Add a description, image, and links to the hubmap topic page so that developers can more easily learn about it.
To associate your repository with the hubmap topic, visit your repo's landing page and select "manage topics."