Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
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Updated
Sep 16, 2018 - Java
Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
Supporting material for MMG 801 Lectures 3–5 on 'Phylogeny and Comparative Genomics'
Retrieves matrix with number of gene/protein hits per query in the blast result. Takes blast tabular file as input.
The official Seqs-Extractor Repository
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
An improved method for predicting binders of HLA-DRB1-04:01
Tool for analysing BLAST output for ncRNA sequences
Sequence similarity searches (e.g. BLAST) made easy
Repo for course 4 bioinformatics
A PHP wrapper for NCBI BLAST URL API
Microsoft Azure HPC & Big Compute
genomic alignment similarity search tool
MView extracts and reformats the results of a sequence database search or multiple alignment.
Seamless Integration of BLAST Sequence Searches in R
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
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