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Dockerfile
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FROM ubuntu:18.04
WORKDIR /opt
COPY . /opt
USER root
ENV IRODS_USER=anonymous
RUN apt-get update && apt-get install -y \
apt-transport-https \
gcc \
gnupg \
wget
RUN wget https://files.renci.org/pub/irods/releases/4.1.10/ubuntu14/irods-icommands-4.1.10-ubuntu14-x86_64.deb \
&& apt-get install -y ./irods-icommands-4.1.10-ubuntu14-x86_64.deb
RUN apt-get update
RUN apt-get install -y python3.6-dev \
python3-pip \
wget \
build-essential \
software-properties-common \
apt-utils \
ffmpeg \
libsm6 \
libxext6
RUN apt-get update
RUN apt-get install -y libgdal-dev
RUN pip3 install --upgrade pip
RUN pip3 install -r requirements.txt
RUN ldconfig
RUN apt-get install -y locales && locale-gen en_US.UTF-8
ENV LANG='en_US.UTF-8' LANGUAGE='en_US:en' LC_ALL='en_US.UTF-8'
# RUN docker pull irods/icommands:4.0.3
# RUN docker run -ti irods/icommands:4.0.3
ENTRYPOINT [ "/usr/bin/python3", "/opt/distributed_pipeline_wrapper.py" ]