diff --git a/README.Rmd b/README.Rmd index e00667915..f57e157c2 100644 --- a/README.Rmd +++ b/README.Rmd @@ -72,14 +72,15 @@ citation("aqp") * [soilDB](https://github.com/ncss-tech/soilDB) * [sharpshootR](https://github.com/ncss-tech/sharpshootR) +## Vignettes + * [Introduction to SoilProfileCollection Objects](https://ncss-tech.github.io/aqp/articles/Introduction-to-SoilProfileCollection-Objects.html) + * [Numerical Classification of Soil Profiles](https://ncss-tech.github.io/aqp/articles/NCSP.html) + * [Overlapping Annotation](https://ncss-tech.github.io/aqp/articles/label-placement.html) + * [What is new in aqp 2.0?](https://ncss-tech.github.io/aqp/articles/new-in-aqp-2.html) + ## aqp in the Wild * https://www.pnas.org/content/115/26/6751 * [as found by Scopus](https://www.scopus.com/results/citedbyresults.uri?sort=plf-f&cite=2-s2.0-84871520076&src=s&imp=t&sid=77a47f45322dcfd492772ab2198cbd60&sot=cite&sdt=a&sl=0&origin=inward&editSaveSearch=&txGid=2178c12c5b47dbcdd8b2f12cd9a81478) * [as found by Google Scholar](https://scholar.google.com/scholar?cites=14155970656017510549&as_sdt=5,29&sciodt=0,29&hl=en) * http://www.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872019000100121 - - -## Dependency Graph -![](https://cran.microsoft.com/packagedata/graphs/aqp.png) - diff --git a/README.md b/README.md index 530854ebc..1cc8e0212 100644 --- a/README.md +++ b/README.md @@ -38,7 +38,15 @@ remotes::install_github("ncss-tech/aqp", dependencies=FALSE, upgrade=FALSE, buil ``` r library(aqp) -#> This is aqp 1.43 +#> The legacy packages maptools, rgdal, and rgeos, underpinning the sp package, +#> which was just loaded, will retire in October 2023. +#> Please refer to R-spatial evolution reports for details, especially +#> https://r-spatial.org/r/2023/05/15/evolution4.html. +#> It may be desirable to make the sf package available; +#> package maintainers should consider adding sf to Suggests:. +#> The sp package is now running under evolution status 2 +#> (status 2 uses the sf package in place of rgdal) +#> This is aqp 2.0 data(sp4) depths(sp4) <- id ~ top + bottom @@ -54,15 +62,25 @@ plot(sp4, color = 'CF') +## Install Suggested Packages + +``` r +p <- c("colorspace", "ape", "soilDB", "latticeExtra", "tactile", "compositions", +"sharpshootR", "markovchain", "xtable", "testthat", "Gmedian", +"farver", "Hmisc", "tibble", "RColorBrewer", "scales", "digest", +"MASS", "mpspline2", "soiltexture", "knitr", "rmarkdown") + +install.packages(p) +``` + ## Citation ``` r citation("aqp") -#> #> To cite aqp in publications use: #> -#> Beaudette, D., Roudier, P., Brown, A. (2022). aqp: Algorithms for -#> Quantitative Pedology. R package version 1.42. +#> Beaudette, D., Roudier, P., Brown, A. (2023). aqp: Algorithms for +#> Quantitative Pedology. R package version 2.0. #> #> #> Beaudette, D.E., Roudier, P., O'Geen, A.T. Algorithms for @@ -77,15 +95,25 @@ citation("aqp") ## Related Packages -- [soilDB](https://github.com/ncss-tech/soilDB) -- [sharpshootR](https://github.com/ncss-tech/sharpshootR) +- [soilDB](https://github.com/ncss-tech/soilDB) +- [sharpshootR](https://github.com/ncss-tech/sharpshootR) + +## Vignettes + +- [Introduction to SoilProfileCollection + Objects](https://ncss-tech.github.io/aqp/articles/Introduction-to-SoilProfileCollection-Objects.html) +- [Numerical Classification of Soil + Profiles](https://ncss-tech.github.io/aqp/articles/NCSP.html) +- [Overlapping + Annotation](https://ncss-tech.github.io/aqp/articles/label-placement.html) +- [What is new in aqp + 2.0?](https://ncss-tech.github.io/aqp/articles/new-in-aqp-2.html) ## aqp in the Wild -- -- [as found by - Scopus](https://www.scopus.com/results/citedbyresults.uri?sort=plf-f&cite=2-s2.0-84871520076&src=s&imp=t&sid=77a47f45322dcfd492772ab2198cbd60&sot=cite&sdt=a&sl=0&origin=inward&editSaveSearch=&txGid=2178c12c5b47dbcdd8b2f12cd9a81478) -- [as found by Google - Scholar](https://scholar.google.com/scholar?cites=14155970656017510549&as_sdt=5,29&sciodt=0,29&hl=en) -- -- +- +- [as found by + Scopus](https://www.scopus.com/results/citedbyresults.uri?sort=plf-f&cite=2-s2.0-84871520076&src=s&imp=t&sid=77a47f45322dcfd492772ab2198cbd60&sot=cite&sdt=a&sl=0&origin=inward&editSaveSearch=&txGid=2178c12c5b47dbcdd8b2f12cd9a81478) +- [as found by Google + Scholar](https://scholar.google.com/scholar?cites=14155970656017510549&as_sdt=5,29&sciodt=0,29&hl=en) +- diff --git a/man/figures/README-unnamed-chunk-2-1.png b/man/figures/README-unnamed-chunk-2-1.png index c1d8474a6..a006be8a0 100644 Binary files a/man/figures/README-unnamed-chunk-2-1.png and b/man/figures/README-unnamed-chunk-2-1.png differ diff --git a/man/figures/README-unnamed-chunk-2-2.png b/man/figures/README-unnamed-chunk-2-2.png index 0dd4519e1..4a5039650 100644 Binary files a/man/figures/README-unnamed-chunk-2-2.png and b/man/figures/README-unnamed-chunk-2-2.png differ