From a3e9a2b766cec5b4c70169b35949e8540b6fa16d Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 30 Sep 2024 08:05:01 +0000 Subject: [PATCH 1/3] update dependencies for ubuntu-latest/py3.10 --- requirements/ubuntu-latest_py3.10.txt | 50 ++++++------- requirements/ubuntu-latest_py3.10_extras.txt | 74 ++++++++++---------- 2 files changed, 62 insertions(+), 62 deletions(-) diff --git a/requirements/ubuntu-latest_py3.10.txt b/requirements/ubuntu-latest_py3.10.txt index 4d5874e1..e6946967 100644 --- a/requirements/ubuntu-latest_py3.10.txt +++ b/requirements/ubuntu-latest_py3.10.txt @@ -12,7 +12,7 @@ aiosqlite==0.20.0 # via ypy-websocket annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -39,15 +39,15 @@ bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer cachelib==0.9.0 # via flask-caching -certifi==2024.7.4 +certifi==2024.8.30 # via requests cffi==1.17.1 # via @@ -68,17 +68,17 @@ crystaltoolkit-extension==0.6.0 # via crystal_toolkit (pyproject.toml) cycler==0.12.1 # via matplotlib -dash==2.15.0 +dash==2.18.1 # via crystal_toolkit (pyproject.toml) dash-core-components==2.0.0 # via dash dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -88,7 +88,7 @@ dnspython==2.6.1 # via # maggma # pymongo -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via jupyter-client @@ -106,13 +106,13 @@ flask==3.0.3 # flask-caching flask-caching==2.3.0 # via crystal_toolkit (pyproject.toml) -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema frozendict==2.4.4 # via crystal_toolkit (pyproject.toml) -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -189,7 +189,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -217,7 +217,7 @@ latexcodec==3.0.0 # via pybtex lazy-loader==0.4 # via scikit-image -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -312,7 +312,7 @@ packaging==24.1 # scikit-image palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # maggma # pymatgen @@ -324,7 +324,7 @@ parso==0.8.4 # via jedi pexpect==4.9.0 # via ipython -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -335,11 +335,11 @@ plotly==5.24.1 # via # dash # pymatgen -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via ipykernel @@ -373,12 +373,12 @@ pygments==2.18.0 # via # ipython # nbconvert -pymatgen==2024.2.20 +pymatgen==2024.9.17.1 # via # crystal_toolkit (pyproject.toml) # emmet-core # mp-api -pymongo==4.6.3 +pymongo==4.9.1 # via maggma pynacl==1.5.0 # via paramiko @@ -416,7 +416,7 @@ referencing==0.35.1 # jsonschema # jsonschema-specifications # jupyter-events -requests==2.32.2 +requests==2.32.3 # via # dash # jupyterlab-server @@ -446,7 +446,7 @@ s3transfer==0.10.2 # via boto3 scikit-image==0.24.0 # via crystal_toolkit (pyproject.toml) -scikit-learn==1.5.0 +scikit-learn==1.5.2 # via crystal_toolkit (pyproject.toml) scipy==1.14.1 # via @@ -494,7 +494,7 @@ terminado==0.18.1 # notebook threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.8.30 +tifffile==2024.9.20 # via scikit-image tinycss2==1.3.0 # via nbconvert @@ -508,7 +508,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # maggma # pymatgen @@ -539,7 +539,7 @@ typing-extensions==4.12.2 # pydantic # pydantic-core # pydash -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen @@ -561,7 +561,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -573,7 +573,7 @@ y-py==0.6.2 # ypy-websocket ypy-websocket==0.8.4 # via jupyter-server-ydoc -zipp==3.19.1 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/ubuntu-latest_py3.10_extras.txt b/requirements/ubuntu-latest_py3.10_extras.txt index b57d054a..a7b72023 100644 --- a/requirements/ubuntu-latest_py3.10_extras.txt +++ b/requirements/ubuntu-latest_py3.10_extras.txt @@ -6,9 +6,9 @@ # aiofiles==22.1.0 # via ypy-websocket -aiohappyeyeballs==2.4.0 +aiohappyeyeballs==2.4.2 # via aiohttp -aiohttp==3.10.2 +aiohttp==3.10.8 # via dephell aioitertools==0.12.0 # via maggma @@ -20,7 +20,7 @@ alabaster==0.7.16 # via sphinx annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -69,17 +69,17 @@ beautifulsoup4==4.12.3 # dash # gdown # nbconvert -black==24.3.0 +black==24.8.0 # via crystal_toolkit (pyproject.toml) bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boltztrap2==24.7.2 +boltztrap2==24.9.4 # via ifermi -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer @@ -87,7 +87,7 @@ cachelib==0.9.0 # via flask-caching cerberus==1.3.5 # via dephell -certifi==2024.7.4 +certifi==2024.8.30 # via # dephell # netcdf4 @@ -148,7 +148,7 @@ dash-extensions==1.0.18 # via crystal_toolkit (pyproject.toml) dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash @@ -156,13 +156,13 @@ dash-testing-stub==0.0.2 # via dash dash-vtk==0.0.9 # via crystal_toolkit (pyproject.toml) -dask==2024.9.0 +dask==2024.9.1 # via # distributed # py4dstem dataclass-wizard==0.22.3 # via dash-extensions -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -201,13 +201,13 @@ dephell-venvs==0.1.18 # via dephell dephell-versioning==0.1.2 # via dephell -dill==0.3.8 +dill==0.3.9 # via # multiprocess # py4dstem distlib==0.3.8 # via virtualenv -distributed==2024.9.0 +distributed==2024.9.1 # via py4dstem dnspython==2.6.1 # via @@ -225,7 +225,7 @@ editorconfig==0.12.4 # via jsbeautifier emdfile==0.0.15 # via py4dstem -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via @@ -254,7 +254,7 @@ flask-caching==2.3.0 # via # crystal_toolkit (pyproject.toml) # dash-extensions -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema @@ -278,7 +278,7 @@ gunicorn[gevent]==23.0.0 # via crystal_toolkit (pyproject.toml) h11==0.14.0 # via wsproto -h5py==3.11.0 +h5py==3.12.1 # via # emdfile # hdf5plugin @@ -294,7 +294,7 @@ hiphive==1.3.1 # via crystal_toolkit (pyproject.toml) identify==2.6.1 # via pre-commit -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -392,7 +392,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -434,7 +434,7 @@ lxml==5.3.0 # nbconvert m2r==0.3.1 # via dephell -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -615,7 +615,7 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # hiphive # maggma @@ -639,7 +639,7 @@ pexpect==4.9.0 # ipython phonopy==2.28.0 # via crystal_toolkit (pyproject.toml) -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -662,11 +662,11 @@ pluggy==1.5.0 # via pytest pre-commit==3.8.0 # via crystal_toolkit (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via @@ -684,7 +684,7 @@ pure-eval==0.2.3 # via stack-data py4dstem==0.14.17 # via crystal_toolkit (pyproject.toml) -pyaml==24.7.0 +pyaml==24.9.0 # via scikit-optimize pybtex==0.24.0 # via @@ -722,7 +722,7 @@ pygments==2.18.0 # sphinx pylops==2.3.1 # via py4dstem -pymatgen==2024.2.20 +pymatgen==2024.9.17.1 # via # crystal_toolkit (pyproject.toml) # emmet-core @@ -730,7 +730,7 @@ pymatgen==2024.2.20 # matminer # mp-api # robocrys -pymongo==4.6.3 +pymongo==4.9.1 # via # maggma # matminer @@ -771,7 +771,7 @@ python-json-logger==2.0.7 # via jupyter-events python-slugify==8.0.4 # via pytest-playwright -python-utils==3.8.2 +python-utils==3.9.0 # via numpy-stl pytz==2024.2 # via @@ -795,7 +795,7 @@ pyzmq==26.2.0 # notebook recommonmark==0.7.1 # via crystal_toolkit (pyproject.toml) -redis==5.0.8 +redis==5.1.0 # via crystal_toolkit (pyproject.toml) referencing==0.35.1 # via @@ -851,7 +851,7 @@ scikit-image==0.24.0 # crystal_toolkit (pyproject.toml) # ifermi # py4dstem -scikit-learn==1.5.0 +scikit-learn==1.4.2 # via # crystal_toolkit (pyproject.toml) # dscribe @@ -976,7 +976,7 @@ threadpoolctl==3.5.0 # via # py4dstem # scikit-learn -tifffile==2024.8.30 +tifffile==2024.9.20 # via scikit-image tinycss2==1.3.0 # via nbconvert @@ -1003,7 +1003,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # emdfile # gdown @@ -1057,7 +1057,7 @@ typing-extensions==4.12.2 # pyee # python-utils # typeguard -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen @@ -1071,7 +1071,7 @@ urllib3[secure,socks]==1.26.20 # selenium urllib3-secure-extra==0.1.0 # via urllib3 -virtualenv==20.26.5 +virtualenv==20.26.6 # via pre-commit vtk==9.3.1 # via dash-vtk @@ -1089,7 +1089,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -1101,15 +1101,15 @@ y-py==0.6.2 # via # jupyter-ydoc # ypy-websocket -yarl==1.11.1 +yarl==1.13.1 # via aiohttp -yaspin==3.0.2 +yaspin==3.1.0 # via dephell ypy-websocket==0.8.4 # via jupyter-server-ydoc zict==3.0.0 # via distributed -zipp==3.19.1 +zipp==3.20.2 # via importlib-metadata zope-event==5.0 # via gevent From c755e8354b26701c6d39f9ea794612a5e6b9b710 Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 30 Sep 2024 08:04:39 +0000 Subject: [PATCH 2/3] update dependencies for ubuntu-latest/py3.11 --- requirements/ubuntu-latest_py3.11.txt | 50 ++++++------- requirements/ubuntu-latest_py3.11_extras.txt | 74 ++++++++++---------- 2 files changed, 62 insertions(+), 62 deletions(-) diff --git a/requirements/ubuntu-latest_py3.11.txt b/requirements/ubuntu-latest_py3.11.txt index 01ef598d..3ced0b7a 100644 --- a/requirements/ubuntu-latest_py3.11.txt +++ b/requirements/ubuntu-latest_py3.11.txt @@ -12,7 +12,7 @@ aiosqlite==0.20.0 # via ypy-websocket annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -39,15 +39,15 @@ bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer cachelib==0.9.0 # via flask-caching -certifi==2024.7.4 +certifi==2024.8.30 # via requests cffi==1.17.1 # via @@ -68,17 +68,17 @@ crystaltoolkit-extension==0.6.0 # via crystal_toolkit (pyproject.toml) cycler==0.12.1 # via matplotlib -dash==2.15.0 +dash==2.18.1 # via crystal_toolkit (pyproject.toml) dash-core-components==2.0.0 # via dash dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -88,7 +88,7 @@ dnspython==2.6.1 # via # maggma # pymongo -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via jupyter-client @@ -102,13 +102,13 @@ flask==3.0.3 # flask-caching flask-caching==2.3.0 # via crystal_toolkit (pyproject.toml) -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema frozendict==2.4.4 # via crystal_toolkit (pyproject.toml) -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -185,7 +185,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -213,7 +213,7 @@ latexcodec==3.0.0 # via pybtex lazy-loader==0.4 # via scikit-image -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -308,7 +308,7 @@ packaging==24.1 # scikit-image palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # maggma # pymatgen @@ -320,7 +320,7 @@ parso==0.8.4 # via jedi pexpect==4.9.0 # via ipython -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -331,11 +331,11 @@ plotly==5.24.1 # via # dash # pymatgen -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via ipykernel @@ -369,12 +369,12 @@ pygments==2.18.0 # via # ipython # nbconvert -pymatgen==2024.2.20 +pymatgen==2024.9.17.1 # via # crystal_toolkit (pyproject.toml) # emmet-core # mp-api -pymongo==4.6.3 +pymongo==4.9.1 # via maggma pynacl==1.5.0 # via paramiko @@ -412,7 +412,7 @@ referencing==0.35.1 # jsonschema # jsonschema-specifications # jupyter-events -requests==2.32.2 +requests==2.32.3 # via # dash # jupyterlab-server @@ -442,7 +442,7 @@ s3transfer==0.10.2 # via boto3 scikit-image==0.24.0 # via crystal_toolkit (pyproject.toml) -scikit-learn==1.5.0 +scikit-learn==1.5.2 # via crystal_toolkit (pyproject.toml) scipy==1.14.1 # via @@ -490,7 +490,7 @@ terminado==0.18.1 # notebook threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.8.30 +tifffile==2024.9.20 # via scikit-image tinycss2==1.3.0 # via nbconvert @@ -502,7 +502,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # maggma # pymatgen @@ -532,7 +532,7 @@ typing-extensions==4.12.2 # pydantic # pydantic-core # pydash -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen @@ -554,7 +554,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -566,7 +566,7 @@ y-py==0.6.2 # ypy-websocket ypy-websocket==0.8.4 # via jupyter-server-ydoc -zipp==3.19.1 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/ubuntu-latest_py3.11_extras.txt b/requirements/ubuntu-latest_py3.11_extras.txt index c1a425c5..b1b05938 100644 --- a/requirements/ubuntu-latest_py3.11_extras.txt +++ b/requirements/ubuntu-latest_py3.11_extras.txt @@ -6,9 +6,9 @@ # aiofiles==22.1.0 # via ypy-websocket -aiohappyeyeballs==2.4.0 +aiohappyeyeballs==2.4.2 # via aiohttp -aiohttp==3.10.2 +aiohttp==3.10.8 # via dephell aioitertools==0.12.0 # via maggma @@ -20,7 +20,7 @@ alabaster==0.7.16 # via sphinx annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -65,17 +65,17 @@ beautifulsoup4==4.12.3 # dash # gdown # nbconvert -black==24.3.0 +black==24.8.0 # via crystal_toolkit (pyproject.toml) bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boltztrap2==24.7.2 +boltztrap2==24.9.4 # via ifermi -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer @@ -83,7 +83,7 @@ cachelib==0.9.0 # via flask-caching cerberus==1.3.5 # via dephell -certifi==2024.7.4 +certifi==2024.8.30 # via # dephell # netcdf4 @@ -144,7 +144,7 @@ dash-extensions==1.0.18 # via crystal_toolkit (pyproject.toml) dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash @@ -152,13 +152,13 @@ dash-testing-stub==0.0.2 # via dash dash-vtk==0.0.9 # via crystal_toolkit (pyproject.toml) -dask==2024.9.0 +dask==2024.9.1 # via # distributed # py4dstem dataclass-wizard==0.22.3 # via dash-extensions -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -197,13 +197,13 @@ dephell-venvs==0.1.18 # via dephell dephell-versioning==0.1.2 # via dephell -dill==0.3.8 +dill==0.3.9 # via # multiprocess # py4dstem distlib==0.3.8 # via virtualenv -distributed==2024.9.0 +distributed==2024.9.1 # via py4dstem dnspython==2.6.1 # via @@ -221,7 +221,7 @@ editorconfig==0.12.4 # via jsbeautifier emdfile==0.0.15 # via py4dstem -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via @@ -243,7 +243,7 @@ flask-caching==2.3.0 # via # crystal_toolkit (pyproject.toml) # dash-extensions -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema @@ -267,7 +267,7 @@ gunicorn[gevent]==23.0.0 # via crystal_toolkit (pyproject.toml) h11==0.14.0 # via wsproto -h5py==3.11.0 +h5py==3.12.1 # via # emdfile # hdf5plugin @@ -283,7 +283,7 @@ hiphive==1.3.1 # via crystal_toolkit (pyproject.toml) identify==2.6.1 # via pre-commit -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -381,7 +381,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -423,7 +423,7 @@ lxml==5.3.0 # nbconvert m2r==0.3.1 # via dephell -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -604,7 +604,7 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # hiphive # maggma @@ -628,7 +628,7 @@ pexpect==4.9.0 # ipython phonopy==2.28.0 # via crystal_toolkit (pyproject.toml) -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -651,11 +651,11 @@ pluggy==1.5.0 # via pytest pre-commit==3.8.0 # via crystal_toolkit (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via @@ -673,7 +673,7 @@ pure-eval==0.2.3 # via stack-data py4dstem==0.14.17 # via crystal_toolkit (pyproject.toml) -pyaml==24.7.0 +pyaml==24.9.0 # via scikit-optimize pybtex==0.24.0 # via @@ -711,7 +711,7 @@ pygments==2.18.0 # sphinx pylops==2.3.1 # via py4dstem -pymatgen==2024.2.20 +pymatgen==2024.9.17.1 # via # crystal_toolkit (pyproject.toml) # emmet-core @@ -719,7 +719,7 @@ pymatgen==2024.2.20 # matminer # mp-api # robocrys -pymongo==4.6.3 +pymongo==4.9.1 # via # maggma # matminer @@ -760,7 +760,7 @@ python-json-logger==2.0.7 # via jupyter-events python-slugify==8.0.4 # via pytest-playwright -python-utils==3.8.2 +python-utils==3.9.0 # via numpy-stl pytz==2024.2 # via @@ -784,7 +784,7 @@ pyzmq==26.2.0 # notebook recommonmark==0.7.1 # via crystal_toolkit (pyproject.toml) -redis==5.0.8 +redis==5.1.0 # via crystal_toolkit (pyproject.toml) referencing==0.35.1 # via @@ -840,7 +840,7 @@ scikit-image==0.24.0 # crystal_toolkit (pyproject.toml) # ifermi # py4dstem -scikit-learn==1.5.0 +scikit-learn==1.4.2 # via # crystal_toolkit (pyproject.toml) # dscribe @@ -965,7 +965,7 @@ threadpoolctl==3.5.0 # via # py4dstem # scikit-learn -tifffile==2024.8.30 +tifffile==2024.9.20 # via scikit-image tinycss2==1.3.0 # via nbconvert @@ -985,7 +985,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # emdfile # gdown @@ -1036,7 +1036,7 @@ typing-extensions==4.12.2 # pyee # python-utils # typeguard -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen @@ -1050,7 +1050,7 @@ urllib3[secure,socks]==1.26.20 # selenium urllib3-secure-extra==0.1.0 # via urllib3 -virtualenv==20.26.5 +virtualenv==20.26.6 # via pre-commit vtk==9.3.1 # via dash-vtk @@ -1068,7 +1068,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -1080,15 +1080,15 @@ y-py==0.6.2 # via # jupyter-ydoc # ypy-websocket -yarl==1.11.1 +yarl==1.13.1 # via aiohttp -yaspin==3.0.2 +yaspin==3.1.0 # via dephell ypy-websocket==0.8.4 # via jupyter-server-ydoc zict==3.0.0 # via distributed -zipp==3.19.1 +zipp==3.20.2 # via importlib-metadata zope-event==5.0 # via gevent From b746361513d657efdfa1e9dfdb4ee07e65a6ed4a Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 30 Sep 2024 08:04:50 +0000 Subject: [PATCH 3/3] update dependencies for ubuntu-latest/py3.9 --- requirements/ubuntu-latest_py3.9.txt | 50 +++++++-------- requirements/ubuntu-latest_py3.9_extras.txt | 68 ++++++++++----------- 2 files changed, 59 insertions(+), 59 deletions(-) diff --git a/requirements/ubuntu-latest_py3.9.txt b/requirements/ubuntu-latest_py3.9.txt index fb4964b8..9a6246a0 100644 --- a/requirements/ubuntu-latest_py3.9.txt +++ b/requirements/ubuntu-latest_py3.9.txt @@ -12,7 +12,7 @@ aiosqlite==0.20.0 # via ypy-websocket annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -39,15 +39,15 @@ bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer cachelib==0.9.0 # via flask-caching -certifi==2024.7.4 +certifi==2024.8.30 # via requests cffi==1.17.1 # via @@ -68,17 +68,17 @@ crystaltoolkit-extension==0.6.0 # via crystal_toolkit (pyproject.toml) cycler==0.12.1 # via matplotlib -dash==2.15.0 +dash==2.18.1 # via crystal_toolkit (pyproject.toml) dash-core-components==2.0.0 # via dash dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -88,7 +88,7 @@ dnspython==2.6.1 # via # maggma # pymongo -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via jupyter-client @@ -106,13 +106,13 @@ flask==3.0.3 # flask-caching flask-caching==2.3.0 # via crystal_toolkit (pyproject.toml) -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema frozendict==2.4.4 # via crystal_toolkit (pyproject.toml) -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -198,7 +198,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -226,7 +226,7 @@ latexcodec==3.0.0 # via pybtex lazy-loader==0.4 # via scikit-image -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -321,7 +321,7 @@ packaging==24.1 # scikit-image palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # maggma # pymatgen @@ -333,7 +333,7 @@ parso==0.8.4 # via jedi pexpect==4.9.0 # via ipython -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -344,11 +344,11 @@ plotly==5.24.1 # via # dash # pymatgen -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via ipykernel @@ -382,12 +382,12 @@ pygments==2.18.0 # via # ipython # nbconvert -pymatgen==2024.2.20 +pymatgen==2024.8.9 # via # crystal_toolkit (pyproject.toml) # emmet-core # mp-api -pymongo==4.6.3 +pymongo==4.9.1 # via maggma pynacl==1.5.0 # via paramiko @@ -425,7 +425,7 @@ referencing==0.35.1 # jsonschema # jsonschema-specifications # jupyter-events -requests==2.32.2 +requests==2.32.3 # via # dash # jupyterlab-server @@ -455,7 +455,7 @@ s3transfer==0.10.2 # via boto3 scikit-image==0.24.0 # via crystal_toolkit (pyproject.toml) -scikit-learn==1.5.0 +scikit-learn==1.5.2 # via crystal_toolkit (pyproject.toml) scipy==1.13.1 # via @@ -517,7 +517,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # maggma # pymatgen @@ -550,13 +550,13 @@ typing-extensions==4.12.2 # pydantic-core # pydash # spglib -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen uri-template==1.3.0 # via jsonschema -urllib3==2.2.3 +urllib3==1.26.20 # via # botocore # requests @@ -572,7 +572,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -584,7 +584,7 @@ y-py==0.6.2 # ypy-websocket ypy-websocket==0.8.4 # via jupyter-server-ydoc -zipp==3.19.1 +zipp==3.20.2 # via # importlib-metadata # importlib-resources diff --git a/requirements/ubuntu-latest_py3.9_extras.txt b/requirements/ubuntu-latest_py3.9_extras.txt index 78af8437..363c9d97 100644 --- a/requirements/ubuntu-latest_py3.9_extras.txt +++ b/requirements/ubuntu-latest_py3.9_extras.txt @@ -6,9 +6,9 @@ # aiofiles==22.1.0 # via ypy-websocket -aiohappyeyeballs==2.4.0 +aiohappyeyeballs==2.4.2 # via aiohttp -aiohttp==3.10.2 +aiohttp==3.10.8 # via dephell aioitertools==0.12.0 # via maggma @@ -20,7 +20,7 @@ alabaster==0.7.16 # via sphinx annotated-types==0.7.0 # via pydantic -anyio==4.5.0 +anyio==4.6.0 # via jupyter-server argon2-cffi==23.1.0 # via @@ -69,17 +69,17 @@ beautifulsoup4==4.12.3 # dash # gdown # nbconvert -black==24.3.0 +black==24.8.0 # via crystal_toolkit (pyproject.toml) bleach==6.1.0 # via nbconvert blinker==1.8.2 # via flask -boltztrap2==24.7.2 +boltztrap2==24.9.4 # via ifermi -boto3==1.35.23 +boto3==1.35.29 # via maggma -botocore==1.35.23 +botocore==1.35.29 # via # boto3 # s3transfer @@ -87,7 +87,7 @@ cachelib==0.9.0 # via flask-caching cerberus==1.3.5 # via dephell -certifi==2024.7.4 +certifi==2024.8.30 # via # dephell # netcdf4 @@ -148,7 +148,7 @@ dash-extensions==1.0.18 # via crystal_toolkit (pyproject.toml) dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.46 +dash-mp-components==0.4.47 # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash @@ -162,7 +162,7 @@ dask==2024.8.0 # py4dstem dataclass-wizard==0.22.3 # via dash-extensions -debugpy==1.8.5 +debugpy==1.8.6 # via ipykernel decorator==5.1.1 # via ipython @@ -201,7 +201,7 @@ dephell-venvs==0.1.18 # via dephell dephell-versioning==0.1.2 # via dephell -dill==0.3.8 +dill==0.3.9 # via # multiprocess # py4dstem @@ -225,7 +225,7 @@ editorconfig==0.12.4 # via jsbeautifier emdfile==0.0.15 # via py4dstem -emmet-core==0.84.2rc10 +emmet-core==0.84.3rc0 # via mp-api entrypoints==0.4 # via @@ -254,7 +254,7 @@ flask-caching==2.3.0 # via # crystal_toolkit (pyproject.toml) # dash-extensions -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema @@ -278,7 +278,7 @@ gunicorn[gevent]==23.0.0 # via crystal_toolkit (pyproject.toml) h11==0.14.0 # via wsproto -h5py==3.11.0 +h5py==3.12.1 # via # emdfile # hdf5plugin @@ -294,7 +294,7 @@ hiphive==1.3.1 # via crystal_toolkit (pyproject.toml) identify==2.6.1 # via pre-commit -idna==3.7 +idna==3.10 # via # anyio # jsonschema @@ -401,7 +401,7 @@ jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.11.2 +jupyter-server==2.14.2 # via # jupyter-server-fileid # jupyterlab @@ -443,7 +443,7 @@ lxml==5.3.0 # nbconvert m2r==0.3.1 # via dephell -maggma==0.69.3 +maggma==0.69.4 # via mp-api markupsafe==2.1.5 # via @@ -624,7 +624,7 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.2 +pandas==2.2.3 # via # hiphive # maggma @@ -648,7 +648,7 @@ pexpect==4.9.0 # ipython phonopy==2.28.0 # via crystal_toolkit (pyproject.toml) -pillow==10.3.0 +pillow==10.4.0 # via # imageio # matplotlib @@ -671,11 +671,11 @@ pluggy==1.5.0 # via pytest pre-commit==3.8.0 # via crystal_toolkit (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via # jupyter-server # notebook -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via ipython psutil==6.0.0 # via @@ -693,7 +693,7 @@ pure-eval==0.2.3 # via stack-data py4dstem==0.14.8 # via crystal_toolkit (pyproject.toml) -pyaml==24.7.0 +pyaml==24.9.0 # via scikit-optimize pybtex==0.24.0 # via @@ -731,7 +731,7 @@ pygments==2.18.0 # sphinx pylops==2.3.1 # via py4dstem -pymatgen==2024.2.20 +pymatgen==2024.8.9 # via # crystal_toolkit (pyproject.toml) # emmet-core @@ -739,7 +739,7 @@ pymatgen==2024.2.20 # matminer # mp-api # robocrys -pymongo==4.6.3 +pymongo==4.9.1 # via # maggma # matminer @@ -780,7 +780,7 @@ python-json-logger==2.0.7 # via jupyter-events python-slugify==8.0.4 # via pytest-playwright -python-utils==3.8.2 +python-utils==3.9.0 # via numpy-stl pytz==2024.2 # via @@ -804,7 +804,7 @@ pyzmq==26.2.0 # notebook recommonmark==0.7.1 # via crystal_toolkit (pyproject.toml) -redis==5.0.8 +redis==5.1.0 # via crystal_toolkit (pyproject.toml) referencing==0.35.1 # via @@ -860,7 +860,7 @@ scikit-image==0.24.0 # crystal_toolkit (pyproject.toml) # ifermi # py4dstem -scikit-learn==1.5.0 +scikit-learn==1.5.2 # via # crystal_toolkit (pyproject.toml) # dscribe @@ -1012,7 +1012,7 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tqdm==4.66.3 +tqdm==4.66.5 # via # emdfile # gdown @@ -1069,7 +1069,7 @@ typing-extensions==4.12.2 # python-utils # spglib # typeguard -tzdata==2024.1 +tzdata==2024.2 # via pandas uncertainties==3.2.2 # via pymatgen @@ -1083,7 +1083,7 @@ urllib3[secure,socks]==1.26.20 # selenium urllib3-secure-extra==0.1.0 # via urllib3 -virtualenv==20.26.5 +virtualenv==20.26.6 # via pre-commit vtk==9.3.1 # via dash-vtk @@ -1101,7 +1101,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.4 # via # dash # flask @@ -1113,15 +1113,15 @@ y-py==0.6.2 # via # jupyter-ydoc # ypy-websocket -yarl==1.11.1 +yarl==1.13.1 # via aiohttp -yaspin==3.0.2 +yaspin==3.1.0 # via dephell ypy-websocket==0.8.4 # via jupyter-server-ydoc zict==3.0.0 # via distributed -zipp==3.19.1 +zipp==3.20.2 # via # importlib-metadata # importlib-resources