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mbed_nonSpectral.py
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mbed_nonSpectral.py
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import numpy as np
import sys
import time
from utils import add_edge, delete_edge, get_indicator_vector, update_res
from pprint import pprint
sys.path.append("./finding-balanced-subgraphs")
import timbal
from scipy import sparse
def get_periphery (A, S):
# Candidate set to contain only the edges on the periphery of As
C = []
for v in S:
for u in A[v, :].nonzero()[1]:
if (u not in S):
C.append((v, u))
return C
def initialize (A, S):
"""
A - largest connected component in H
S - set of vertices in the MBS
will return the initial node-labelling and candidate set
"""
ind = get_indicator_vector(A[S,:][:,S])
x_v = np.zeros(shape=A.shape[0])
x_v[S] = ind
# Candidate set to contain only the edges on the periphery of As
C = []
for v in S:
for u in A[v, :].nonzero()[1]:
if (x_v[u] == 0):
C.append((v, u))
return x_v, C
def node_out (x_v, e):
if ((x_v[e[0]] != 0) and (x_v[e[1]] == 0)):
return e[1]
elif ((x_v[e[0]] == 0) and (x_v[e[1]] != 0)):
return e[0]
else:
raise Exception('Edge ', e, ' that is passed not on the periphery')
def find_label (A, u, x_v):
connected = np.abs(A[u,:]).dot(np.abs(x_v)) > 0
if connected:
x = A[u,:]
ip = x.dot(x_v)
nip = np.abs(x).dot(np.abs(x_v))
agree = np.abs(ip)==nip
if agree:
return (1 if (ip >= 0) else -1)
else:
return 0
else:
raise Exception("vertex unconnected from MBS")
def count_compatible (u, A, x_v):
cc = 1
nbrs_u = np.nonzero(A[u,:])[1]
for w in nbrs_u:
if ((x_v[w] != 0) and (x_v[w] != A[u, w] * x_v[u])):
# print((u, x_v[u]), " ", A[u, w], " ", (w, x_v[w]))
return 0
for w in nbrs_u:
if (x_v[w] == 0):
x_v[w] = A[u, w] * x_v[u]
cc_w = count_compatible(w, A, x_v)
if (cc_w == 0):
x_v[w] = 0
continue
cc += cc_w
return cc
def marginal_gain_ed (x_v, A, e):
"""
Calculating f_{S_{i-1}}(e) for each iteration
"""
ue = node_out(x_v, e)
e_sign = A[e]
A = delete_edge (A, e)
try:
label_ue = find_label (A, ue, x_v)
except:
# Edge making graph unconnected
A = add_edge (A, e, e_sign)
return -1
if (label_ue == 0):
A = add_edge (A, e, e_sign)
return 0
else:
x_v[ue] = label_ue
cc = count_compatible (ue, A, x_v.copy())
A = add_edge (A, e, e_sign)
x_v[ue] = 0
# x_v = unset_all (ue, x_v, A, S)
return (cc)
def update_chosen (u, x_v, A, C):
"""
Update the labelling and find new candidate set after deleting an edge
"""
nbrs_u = np.nonzero(A[u,:])[1]
for w in nbrs_u:
if ((x_v[w] != 0) and (x_v[w] != A[u, w] * x_v[u])):
x_v[u] = 0
return (C, [])
C = [e for e in C if (u not in e)]
new_candidates = []
for w in nbrs_u:
if (x_v[w] == 0):
x_v[w] = A[u, w] * x_v[u]
C, new_candidates_w = update_chosen (w, x_v, A, C)
if (x_v[w] == 0):
new_candidates.append((u, w))
else:
new_candidates += new_candidates_w
return (C, new_candidates)
def greedy_solve (x_v, C, A, S, budgets, start_time, randomize=True, verbose=True):
"""
(Randomized) Greedy Algorithm to maximize balance after deleting budget no. of edges
"""
A = A.copy()
edges_removed = []
results_info = []
budget = np.max(budgets)
added_nodes = []
# marginal_benefits=sparse.csr_matrix(([], ([], [])),
# shape=(A.shape[0], A.shape[0])).astype(np.int)
marginal_benefits = {}
for i in range(budget):
if (verbose):
print("Budget:", i)
if (len(C) == 0):
# Maximum balance achieved - budget high.
results_info = update_res(results_info, budgets, time.time() - start_time, len(x_v.nonzero()[0]) - len(S))
break
# S_previter = np.nonzero(x_v)[1]
rows, cols = [], []
out_nodes = []
for v in added_nodes:
for u in A[added_nodes, :].nonzero()[1]:
if (x_v[u] != 0):
out_nodes.append(u)
while (True):
new_count = 0
for e in C:
if ((e not in marginal_benefits) or (e[0] in out_nodes) or (e[1] in out_nodes)): #or (len(A[e[0],:][:,added_nodes].nonzero()[1]) > 1) or (len(A[e[1],:][:,added_nodes].nonzero()[1]) > 1)):#(e[0] in added_nodes) and (e[1] in added_nodes))):
new_count += 1
marginal_benefits[e] = marginal_gain_ed (x_v, A, e)
if (verbose):
print("New count:", new_count, "out of", len(C))
# marginal_benefits=sparse.csr_matrix(marginal_benefits)
# marginal_benefits_C = np.array(marginal_benefits[[e[0] for e in C], [e[1] for e in C]]).ravel()
marginal_benefits_C = np.array(marginal_benefits.values())
if (np.all(marginal_benefits_C == -1)):
# No more edges can be removed without making the graph unconnected
results_info = update_res(results_info, budgets, time.time() - start_time, len(x_v.nonzero()[0]) - len(S))
return results_info, np.nonzero(x_v)[0], A, edges_removed
if (randomize):
Mi = sorted(C, key=lambda x: marginal_benefits[x],
reverse=True)[:budget]
e_chosen = Mi[np.random.choice(np.arange(len(Mi)))]
# Mi = sorted(range(len(C)), key=lambda x: marginal_benefits_C[x],
# reverse=True)[:budget]
# e_ind = np.random.choice(Mi)
else:
# e_ind = np.argmax(marginal_benefits_C)
e_chosen = sorted(C, key=lambda x: marginal_benefits[x], reverse=True)[0]
if (marginal_benefits[e_chosen] > -1):
break
# if (marginal_benefits_C[e_ind] > -1):
# break
# e_chosen = C[e_ind]
edges_removed.append(e_chosen)
try:
ue = node_out (x_v, e_chosen)
except:
print(e_chosen, " is not on the periphery")
return
A = delete_edge (A, e_chosen)
old_xv = x_v.copy()
x_v[ue] = find_label (A, ue, x_v)
C.remove(e_chosen)
if (verbose):
print(e_chosen, " is chosen and marginal gain is ", marginal_benefits[e_chosen]) #marginal_benefits_C[e_ind])
if (x_v[ue] != 0):
C, C_i = update_chosen(ue, x_v, A, C)
# if (verbose):
# print("Edges added to C: ", C_i)
C = C + C_i
added_nodes = [u for u in x_v.nonzero()[0] if (old_xv[u] == 0)]
if (len(edges_removed) in budgets):
select_time = time.time() - start_time
results_info.append({"Budget": len(edges_removed), "RT": select_time, "Delta": len(np.nonzero(x_v)[0]) - len(S)})
if (verbose):
print(len(timbal.process_only_second(A, S)), len(np.nonzero(x_v)[0]))
print("\n")
return results_info, np.nonzero(x_v)[0], A, edges_removed
def mbed_solve (A, budgets, S, randomize=True, verbose=True):
"""
Maximize balance after deleting budget no. of edges from graph given initial MBS
"""
# print(S)
start_time = time.time()
x_v, C = initialize(A, S)
if (verbose):
print("Initialized")
print("V1: ", np.sum(x_v == 1), ", V2: ", np.sum(x_v == -1))
results_info, S_new, Ad, edges_removed = greedy_solve (x_v, C, A, S, budgets, start_time, randomize=randomize, verbose=verbose)
# S_new = timbal.process_only_second(Ad, S)
return results_info, S_new, Ad, edges_removed