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proposal to change installation section #6

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zlskidmore opened this issue Oct 30, 2018 · 2 comments
Open

proposal to change installation section #6

zlskidmore opened this issue Oct 30, 2018 · 2 comments

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@zlskidmore
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Going through the student installation yesterday it seemed fairly repetitive. I would propose changing it from installing every tool which is in the AMI section anyway to different methods of installation.

i.e.:
install samtools binary
install samtools from source
install java tool (picard)

maybe a few other things

@malachig @obigriffith what are your thoughts on this?

@jeszyman
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I'm starting to edit the Installation page, and agree with Zach's comment. I was thinking of referencing the full install on the AWS AMI setup page, and using a few specific example to highlight install tools and principles (dependencies, package managers, chmod, configure-make-install, unzip commands, etc.). Much of this is already in the descriptions on the Installation page.

@malachig @obigriffith OK to reformat as above?

@malachig
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Yes. Sounds good!

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