README.md

symplephy: A simple package for Bayesian phylogenetic analysis

The package is useful to perform Bayesian inference on two-species alignments under the JC69 (and soon) the K80 nucleotide substitution models.

Installation

install_github("dosreislab/simplephy")

Example

You can reproduce fig. 1 in dos Reis et al. (2016, Nat. Rev. Genet., 17: 71)

example("jc69.rt")