From df930c2e92a21a95ef1f2d8b4c62b85516e39369 Mon Sep 17 00:00:00 2001 From: Infant Alex Date: Tue, 1 Aug 2023 10:46:57 +0200 Subject: [PATCH] Fix/dependency version upgrades (#85) * Introducing limit option for ls * Dependency updates * Removed the duplicate tests --- CHANGELOG.md | 8 + cognite/cdffs/__init__.py | 2 +- docs/requirements.txt | 4 +- poetry.lock | 722 +++++++++++++++++++------------------- pyproject.toml | 18 +- 5 files changed, 382 insertions(+), 372 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 6c39522..68682ef 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -121,3 +121,11 @@ Changes are grouped as follows - Dependency updates for docs & source code. [unreleased]: + + +## [0.2.7] - 2023-08-01 + +### Fixed +- Dependency updates for docs & source code to eliminate the security vulnerabilities found on the `cryptography` and `certifi` packages. + +[unreleased]: diff --git a/cognite/cdffs/__init__.py b/cognite/cdffs/__init__.py index 85c6da6..a3976cd 100644 --- a/cognite/cdffs/__init__.py +++ b/cognite/cdffs/__init__.py @@ -3,7 +3,7 @@ from .spec import CdfFileSystem -__version__ = "0.2.6" +__version__ = "0.2.7" __all__ = ["CdfFileSystem"] fsspec.register_implementation(CdfFileSystem.protocol, CdfFileSystem) diff --git a/docs/requirements.txt b/docs/requirements.txt index 2f4e516..63cd922 100644 --- a/docs/requirements.txt +++ b/docs/requirements.txt @@ -1,5 +1,5 @@ toml==0.10.2 fsspec==2023.6.0 -cognite-sdk==6.5.8 +cognite-sdk==6.12.0 requests==2.31.0 -pydantic==1.10.10 +pydantic==1.10.12 diff --git a/poetry.lock b/poetry.lock index 53dde65..8b95e32 100644 --- a/poetry.lock +++ b/poetry.lock @@ -39,11 +39,11 @@ python-versions = ">=3.7" [[package]] name = "black" -version = "23.3.0" +version = "23.7.0" description = "The uncompromising code formatter." category = "dev" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [package.dependencies] click = ">=8.0.0" @@ -77,7 +77,7 @@ css = ["tinycss2 (>=1.1.0,<1.2)"] [[package]] name = "certifi" -version = "2023.5.7" +version = "2023.7.22" description = "Python package for providing Mozilla's CA Bundle." category = "main" optional = false @@ -104,7 +104,7 @@ python-versions = ">=3.6.1" [[package]] name = "charset-normalizer" -version = "3.1.0" +version = "3.2.0" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." category = "main" optional = false @@ -112,7 +112,7 @@ python-versions = ">=3.7.0" [[package]] name = "click" -version = "8.1.3" +version = "8.1.6" description = "Composable command line interface toolkit" category = "dev" optional = false @@ -159,7 +159,7 @@ python-versions = ">=3.6" [[package]] name = "cognite-sdk" -version = "6.5.8" +version = "6.12.0" description = "Cognite Python SDK" category = "main" optional = false @@ -181,6 +181,7 @@ numpy = ["numpy (>=1.20,<2.0)"] pandas = ["backports-zoneinfo[tzdata] (>=0.2.1)", "pandas (>=1.4)"] pyodide = ["pyodide-http (>=0.2.0,<0.3.0)"] sympy = ["sympy"] +yaml = ["PyYAML (>=6.0,<7.0)"] [[package]] name = "colorama" @@ -206,7 +207,7 @@ toml = ["tomli"] [[package]] name = "cryptography" -version = "41.0.1" +version = "41.0.2" description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers." category = "main" optional = false @@ -227,7 +228,7 @@ test-randomorder = ["pytest-randomly"] [[package]] name = "dask" -version = "2023.6.1" +version = "2023.7.1" description = "Parallel PyData with Task Scheduling" category = "dev" optional = false @@ -248,12 +249,12 @@ array = ["numpy (>=1.21)"] complete = ["dask[array,dataframe,diagnostics,distributed]", "lz4 (>=4.3.2)", "pyarrow (>=7.0)"] dataframe = ["numpy (>=1.21)", "pandas (>=1.3)"] diagnostics = ["bokeh (>=2.4.2)", "jinja2 (>=2.10.3)"] -distributed = ["distributed (==2023.6.1)"] +distributed = ["distributed (==2023.7.1)"] test = ["pandas[test]", "pre-commit", "pytest", "pytest-cov", "pytest-rerunfailures", "pytest-xdist"] [[package]] name = "distlib" -version = "0.3.6" +version = "0.3.7" description = "Distribution utilities" category = "dev" optional = false @@ -277,7 +278,7 @@ python-versions = ">=3.6" [[package]] name = "exceptiongroup" -version = "1.1.1" +version = "1.1.2" description = "Backport of PEP 654 (exception groups)" category = "dev" optional = false @@ -331,7 +332,7 @@ test = ["Fiona[s3]", "pytest (>=7)", "pytest-cov", "pytz"] [[package]] name = "flake8" -version = "6.0.0" +version = "6.1.0" description = "the modular source code checker: pep8 pyflakes and co" category = "dev" optional = false @@ -339,8 +340,8 @@ python-versions = ">=3.8.1" [package.dependencies] mccabe = ">=0.7.0,<0.8.0" -pycodestyle = ">=2.10.0,<2.11.0" -pyflakes = ">=3.0.0,<3.1.0" +pycodestyle = ">=2.11.0,<2.12.0" +pyflakes = ">=3.1.0,<3.2.0" [[package]] name = "flake8-pyproject" @@ -417,11 +418,11 @@ shapely = ">=1.7.1" [[package]] name = "identify" -version = "2.5.24" +version = "2.5.26" description = "File identification library for Python" category = "dev" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [package.extras] license = ["ukkonen"] @@ -444,11 +445,11 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "importlib-metadata" -version = "6.7.0" +version = "6.8.0" description = "Read metadata from Python packages" category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [package.dependencies] zipp = ">=0.5" @@ -456,7 +457,7 @@ zipp = ">=0.5" [package.extras] docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] perf = ["ipython"] -testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"] +testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"] [[package]] name = "iniconfig" @@ -468,18 +469,18 @@ python-versions = ">=3.7" [[package]] name = "jaraco-classes" -version = "3.2.3" +version = "3.3.0" description = "Utility functions for Python class constructs" category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [package.dependencies] more-itertools = "*" [package.extras] -docs = ["jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)"] -testing = ["flake8 (<5)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"] +docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-ruff"] [[package]] name = "jeepney" @@ -509,11 +510,11 @@ i18n = ["Babel (>=2.7)"] [[package]] name = "keyring" -version = "24.0.1" +version = "24.2.0" description = "Store and access your passwords safely." category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [package.dependencies] importlib-metadata = {version = ">=4.11.4", markers = "python_version < \"3.12\""} @@ -582,22 +583,22 @@ python-versions = ">=3.7" [[package]] name = "more-itertools" -version = "9.1.0" +version = "10.0.0" description = "More routines for operating on iterables, beyond itertools" category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" [[package]] name = "msal" -version = "1.22.0" +version = "1.23.0" description = "The Microsoft Authentication Library (MSAL) for Python library enables your app to access the Microsoft Cloud by supporting authentication of users with Microsoft Azure Active Directory accounts (AAD) and Microsoft Accounts (MSA) using industry standard OAuth2 and OpenID Connect." category = "main" optional = false python-versions = "*" [package.dependencies] -cryptography = ">=0.6,<43" +cryptography = ">=0.6,<44" PyJWT = {version = ">=1.0.0,<3", extras = ["crypto"]} requests = ">=2.0.0,<3" @@ -643,7 +644,7 @@ zfpy = ["zfpy (>=1.0.0)"] [[package]] name = "numpy" -version = "1.25.0" +version = "1.25.2" description = "Fundamental package for array computing in Python" category = "dev" optional = false @@ -707,7 +708,7 @@ complete = ["blosc", "numpy (>=1.9.0)", "pandas (>=0.19.0)", "pyzmq"] [[package]] name = "pathspec" -version = "0.11.1" +version = "0.11.2" description = "Utility library for gitignore style pattern matching of file paths." category = "dev" optional = false @@ -726,15 +727,15 @@ testing = ["pytest", "pytest-cov"] [[package]] name = "platformdirs" -version = "3.7.0" +version = "3.10.0" description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." category = "dev" optional = false python-versions = ">=3.7" [package.extras] -docs = ["furo (>=2023.5.20)", "proselint (>=0.13)", "sphinx (>=7.0.1)", "sphinx-autodoc-typehints (>=1.23,!=1.23.4)"] -test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.3.1)", "pytest-cov (>=4.1)", "pytest-mock (>=3.10)"] +docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.1)", "sphinx-autodoc-typehints (>=1.24)"] +test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-cov (>=4.1)", "pytest-mock (>=3.11.1)"] [[package]] name = "pluggy" @@ -783,7 +784,7 @@ virtualenv = ">=20.10.0" [[package]] name = "protobuf" -version = "4.23.3" +version = "4.23.4" description = "" category = "main" optional = false @@ -802,11 +803,11 @@ numpy = ">=1.16.6" [[package]] name = "pycodestyle" -version = "2.10.0" +version = "2.11.0" description = "Python style guide checker" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" [[package]] name = "pycparser" @@ -818,7 +819,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "pydantic" -version = "1.10.10" +version = "1.10.12" description = "Data validation and settings management using python type hints" category = "main" optional = false @@ -833,11 +834,11 @@ email = ["email-validator (>=1.0.3)"] [[package]] name = "pyflakes" -version = "3.0.1" +version = "3.1.0" description = "passive checker of Python programs" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" [[package]] name = "pygments" @@ -852,7 +853,7 @@ plugins = ["importlib-metadata"] [[package]] name = "pyjwt" -version = "2.7.0" +version = "2.8.0" description = "JSON Web Token implementation in Python" category = "main" optional = false @@ -880,7 +881,7 @@ certifi = "*" [[package]] name = "pytest" -version = "7.3.2" +version = "7.4.0" description = "pytest: simple powerful testing with Python" category = "dev" optional = false @@ -944,7 +945,7 @@ python-versions = "*" [[package]] name = "pywin32-ctypes" -version = "0.2.1" +version = "0.2.2" description = "A (partial) reimplementation of pywin32 using ctypes/cffi" category = "main" optional = false @@ -952,7 +953,7 @@ python-versions = ">=3.6" [[package]] name = "pyyaml" -version = "6.0" +version = "6.0.1" description = "YAML parser and emitter for Python" category = "dev" optional = false @@ -1020,7 +1021,7 @@ requests = ">=2.0.1,<3.0.0" [[package]] name = "responses" -version = "0.23.1" +version = "0.23.2" description = "A utility library for mocking out the `requests` Python library." category = "dev" optional = false @@ -1028,9 +1029,9 @@ python-versions = ">=3.7" [package.dependencies] pyyaml = "*" -requests = ">=2.22.0,<3.0" +requests = ">=2.30.0,<3.0" types-PyYAML = "*" -urllib3 = ">=1.25.10" +urllib3 = ">=2.0.0,<3.0" [package.extras] tests = ["coverage (>=6.0.0)", "flake8", "mypy", "pytest (>=7.0.0)", "pytest-asyncio", "pytest-cov", "pytest-httpserver", "tomli", "tomli-w", "types-requests"] @@ -1048,7 +1049,7 @@ idna2008 = ["idna"] [[package]] name = "rich" -version = "13.4.2" +version = "13.5.1" description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal" category = "main" optional = false @@ -1300,7 +1301,7 @@ urllib3 = ">=1.26.0" [[package]] name = "types-pyyaml" -version = "6.0.12.10" +version = "6.0.12.11" description = "Typing stubs for PyYAML" category = "dev" optional = false @@ -1308,7 +1309,7 @@ python-versions = "*" [[package]] name = "types-requests" -version = "2.31.0.1" +version = "2.31.0.2" description = "Typing stubs for requests" category = "dev" optional = false @@ -1319,7 +1320,7 @@ types-urllib3 = "*" [[package]] name = "types-urllib3" -version = "1.26.25.13" +version = "1.26.25.14" description = "Typing stubs for urllib3" category = "dev" optional = false @@ -1327,7 +1328,7 @@ python-versions = "*" [[package]] name = "typing-extensions" -version = "4.6.3" +version = "4.7.1" description = "Backported and Experimental Type Hints for Python 3.7+" category = "main" optional = false @@ -1343,7 +1344,7 @@ python-versions = ">=2" 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-11,18 +11,18 @@ packages = [ [tool.poetry.group.test.dependencies] pandas = "^1.5.1" pyarrow = "^12.0.0" -zarr = "^2.13.3" -dask = "^2023.6.1" -xarray = "^2023.6.0" +zarr = "^2.16.0" +dask = "^2023.7.1" +xarray = "^2023.7.0" geodatasets = "^2023.3.0" geopandas = "^0.13.2" [tool.poetry.group.dev.dependencies] types-requests = "^2.28.11.5" pytest-cov = "^4.1.0" -black = "^23.3.0" -responses = "^0.23.1" -flake8 = "6.0.0" +black = "^23.7.0" +responses = "^0.23.2" +flake8 = "^6.1.0" pre-commit = "^3.2.2" flake8-pyproject = "^1.2.3" twine = "^4.0.2" @@ -68,11 +68,11 @@ commands = [tool.poetry.dependencies] python = "^3.9.10" -cognite-sdk = "^6.5.8" +cognite-sdk = "^6.12.0" fsspec = "^2023.6.0" requests = "^2.31.0" twine = "^4.0.2" -pydantic = "1.10.10" +pydantic = "1.10.12" python-dotenv = "^1.0.0" [tool.poetry.dev-dependencies]