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cellular_component_ontology.expanded.yaml
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cellular_component_ontology.expanded.yaml
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name: Cellular_component_ontology
id: https://example.org/Cellular-component-ontology
imports:
- linkml:types
prefixes:
Cellular_component_ontology: https://example.org/Cellular-component-ontology
linkml: https://w3id.org/linkml/
default_prefix: Cellular_component_ontology
enums:
CellularComponentOntology_ontology_options:
include:
- reachable_from:
source_ontology: obo:hcao
source_nodes:
- GO:0005575
relationship_types:
- rdfs:subClassOf
is_direct: false
include_self: false
- reachable_from:
source_ontology: obo:go
source_nodes:
- GO:0005575
relationship_types:
- rdfs:subClassOf
is_direct: false
include_self: false
permissible_values:
GO:0000785:
text: GO:0000785
description: chromatin
meaning: GO:0000785
GO:0005634:
text: GO:0005634
description: nucleus
meaning: GO:0005634
GO:0015629:
text: GO:0015629
description: actin cytoskeleton
meaning: GO:0015629
GO:0099143:
text: GO:0099143
description: presynaptic actin cytoskeleton
meaning: GO:0099143
GO:0070013:
text: GO:0070013
description: intracellular organelle lumen
meaning: GO:0070013
GO:0099699:
text: GO:0099699
description: integral component of synaptic membrane
meaning: GO:0099699
GO:0005886:
text: GO:0005886
description: plasma membrane
meaning: GO:0005886
GO:0005856:
text: GO:0005856
description: cytoskeleton
meaning: GO:0005856
GO:0016020:
text: GO:0016020
description: membrane
meaning: GO:0016020
GO:0005884:
text: GO:0005884
description: actin filament
meaning: GO:0005884
GO:0099503:
text: GO:0099503
description: secretory vesicle
meaning: GO:0099503
GO:0005794:
text: GO:0005794
description: Golgi apparatus
meaning: GO:0005794
GO:0099571:
text: GO:0099571
description: postsynaptic cytoskeleton
meaning: GO:0099571
CP:0000028:
text: CP:0000028
meaning: CP:0000028
GO:0000791:
text: GO:0000791
description: euchromatin
meaning: GO:0000791
GO:0005719:
text: GO:0005719
description: nuclear euchromatin
meaning: GO:0005719
GO:0031982:
text: GO:0031982
description: vesicle
meaning: GO:0031982
GO:0005764:
text: GO:0005764
description: lysosome
meaning: GO:0005764
CP:0000040:
text: CP:0000040
meaning: CP:0000040
PR:000050170:
text: PR:000050170
description: IgD immunoglobulin complex (human)
meaning: PR:000050170
GO:0098590:
text: GO:0098590
description: plasma membrane region
meaning: GO:0098590
GO:0043228:
text: GO:0043228
description: non-membrane-bounded organelle
meaning: GO:0043228
GO:0098797:
text: GO:0098797
description: plasma membrane protein complex
meaning: GO:0098797
GO:0030017:
text: GO:0030017
description: sarcomere
meaning: GO:0030017
GO:0099512:
text: GO:0099512
description: supramolecular fiber
meaning: GO:0099512
GO:0030667:
text: GO:0030667
description: secretory granule membrane
meaning: GO:0030667
GO:0045202:
text: GO:0045202
description: synapse
meaning: GO:0045202
GO:0005766:
text: GO:0005766
description: primary lysosome
meaning: GO:0005766
GO:1903561:
text: GO:1903561
description: extracellular vesicle
meaning: GO:1903561
GO:0099568:
text: GO:0099568
description: cytoplasmic region
meaning: GO:0099568
GO:0097708:
text: GO:0097708
description: intracellular vesicle
meaning: GO:0097708
GO:0042571:
text: GO:0042571
description: immunoglobulin complex, circulating
meaning: GO:0042571
GO:0042611:
text: GO:0042611
description: MHC protein complex
meaning: GO:0042611
GO:0042582:
text: GO:0042582
description: azurophil granule
meaning: GO:0042582
GO:0042995:
text: GO:0042995
description: cell projection
meaning: GO:0042995
GO:0031224:
text: GO:0031224
description: intrinsic component of membrane
meaning: GO:0031224
GO:0031300:
text: GO:0031300
description: intrinsic component of organelle membrane
meaning: GO:0031300
GO:0099080:
text: GO:0099080
description: supramolecular complex
meaning: GO:0099080
GO:0031090:
text: GO:0031090
description: organelle membrane
meaning: GO:0031090
GO:0000790:
text: GO:0000790
description: nuclear chromatin
meaning: GO:0000790
GO:0005775:
text: GO:0005775
description: vacuolar lumen
meaning: GO:0005775
GO:0071753:
text: GO:0071753
description: IgM immunoglobulin complex
meaning: GO:0071753
GO:0043232:
text: GO:0043232
description: intracellular non-membrane-bounded organelle
meaning: GO:0043232
GO:0043231:
text: GO:0043231
description: intracellular membrane-bounded organelle
meaning: GO:0043231
GO:0099738:
text: GO:0099738
description: cell cortex region
meaning: GO:0099738
GO:0033001:
text: GO:0033001
description: Fc-gamma receptor III complex
meaning: GO:0033001
GO:0030054:
text: GO:0030054
description: cell junction
meaning: GO:0030054
GO:0000792:
text: GO:0000792
description: heterochromatin
meaning: GO:0000792
GO:0043384:
text: GO:0043384
description: pre-T cell receptor complex
meaning: GO:0043384
GO:0031301:
text: GO:0031301
description: integral component of organelle membrane
meaning: GO:0031301
GO:0005576:
text: GO:0005576
description: extracellular region
meaning: GO:0005576
GO:0042105:
text: GO:0042105
description: alpha-beta T cell receptor complex
meaning: GO:0042105
GO:0031981:
text: GO:0031981
description: nuclear lumen
meaning: GO:0031981
GO:0000229:
text: GO:0000229
description: cytoplasmic chromosome
meaning: GO:0000229
GO:0120111:
text: GO:0120111
description: neuron projection cytoplasm
meaning: GO:0120111
GO:0042613:
text: GO:0042613
description: MHC class II protein complex
meaning: GO:0042613
GO:0031974:
text: GO:0031974
description: membrane-enclosed lumen
meaning: GO:0031974
GO:0019815:
text: GO:0019815
description: B cell receptor complex
meaning: GO:0019815
GO:0005902:
text: GO:0005902
description: microvillus
meaning: GO:0005902
GO:0031410:
text: GO:0031410
description: cytoplasmic vesicle
meaning: GO:0031410
CP:0000037:
text: CP:0000037
meaning: CP:0000037
GO:0098858:
text: GO:0098858
description: actin-based cell projection
meaning: GO:0098858
GO:1904724:
text: GO:1904724
description: tertiary granule lumen
meaning: GO:1904724
GO:0048770:
text: GO:0048770
description: pigment granule
meaning: GO:0048770
GO:0043233:
text: GO:0043233
description: organelle lumen
meaning: GO:0043233
GO:0030424:
text: GO:0030424
description: axon
meaning: GO:0030424
GO:0043229:
text: GO:0043229
description: intracellular organelle
meaning: GO:0043229
GO:0005737:
text: GO:0005737
description: cytoplasm
meaning: GO:0005737
GO:0030990:
text: GO:0030990
description: intraciliary transport particle
meaning: GO:0030990
GO:0110165:
text: GO:0110165
description: cellular anatomical entity
meaning: GO:0110165
GO:0098802:
text: GO:0098802
description: plasma membrane signaling receptor complex
meaning: GO:0098802
GO:0099569:
text: GO:0099569
description: presynaptic cytoskeleton
meaning: GO:0099569
GO:0032838:
text: GO:0032838
description: plasma membrane bounded cell projection cytoplasm
meaning: GO:0032838
GO:0005694:
text: GO:0005694
description: chromosome
meaning: GO:0005694
GO:0098793:
text: GO:0098793
description: presynapse
meaning: GO:0098793
GO:0043235:
text: GO:0043235
description: receptor complex
meaning: GO:0043235
GO:0071738:
text: GO:0071738
description: IgD immunoglobulin complex
meaning: GO:0071738
GO:0098796:
text: GO:0098796
description: membrane protein complex
meaning: GO:0098796
GO:0012506:
text: GO:0012506
description: vesicle membrane
meaning: GO:0012506
GO:0000228:
text: GO:0000228
description: nuclear chromosome
meaning: GO:0000228
GO:0043292:
text: GO:0043292
description: contractile fiber
meaning: GO:0043292
CP:0000035:
text: CP:0000035
meaning: CP:0000035
GO:0031226:
text: GO:0031226
description: intrinsic component of plasma membrane
meaning: GO:0031226
GO:0097060:
text: GO:0097060
description: synaptic membrane
meaning: GO:0097060
PR:000025402:
text: PR:000025402
description: T cell receptor co-receptor CD8
meaning: PR:000025402
GO:0000313:
text: GO:0000313
description: organellar ribosome
meaning: GO:0000313
GO:0043230:
text: GO:0043230
description: extracellular organelle
meaning: GO:0043230
PR:000050032:
text: PR:000050032
description: immunoglobulin complex (human)
meaning: PR:000050032
GO:0030659:
text: GO:0030659
description: cytoplasmic vesicle membrane
meaning: GO:0030659
GO:0035369:
text: GO:0035369
description: pre-B cell receptor complex
meaning: GO:0035369
GO:0097014:
text: GO:0097014
description: ciliary plasm
meaning: GO:0097014
GO:0005730:
text: GO:0005730
description: nucleolus
meaning: GO:0005730
GO:0005622:
text: GO:0005622
description: intracellular anatomical structure
meaning: GO:0005622
GO:0099240:
text: GO:0099240
description: intrinsic component of synaptic membrane
meaning: GO:0099240
GO:0000789:
text: GO:0000789
description: cytoplasmic chromatin
meaning: GO:0000789
CP:0000000:
text: CP:0000000
meaning: CP:0000000
D96882F1-8709-49AB-BCA9-772A67EA6C33:
text: D96882F1-8709-49AB-BCA9-772A67EA6C33
meaning: D96882F1-8709-49AB-BCA9-772A67EA6C33
GO:0005840:
text: GO:0005840
description: ribosome
meaning: GO:0005840
GO:0042101:
text: GO:0042101
description: T cell receptor complex
meaning: GO:0042101
GO:0012505:
text: GO:0012505
description: endomembrane system
meaning: GO:0012505
GO:0099081:
text: GO:0099081
description: supramolecular polymer
meaning: GO:0099081
GO:0042589:
text: GO:0042589
description: zymogen granule membrane
meaning: GO:0042589
CP:0000027:
text: CP:0000027
meaning: CP:0000027
GO:0005929:
text: GO:0005929
description: cilium
meaning: GO:0005929
GO:0032432:
text: GO:0032432
description: actin filament bundle
meaning: GO:0032432
GO:0032991:
text: GO:0032991
description: protein-containing complex
meaning: GO:0032991
GO:0000323:
text: GO:0000323
description: lytic vacuole
meaning: GO:0000323
GO:0032997:
text: GO:0032997
description: Fc receptor complex
meaning: GO:0032997
GO:0043226:
text: GO:0043226
description: organelle
meaning: GO:0043226
GO:0120025:
text: GO:0120025
description: plasma membrane bounded cell projection
meaning: GO:0120025
GO:0071944:
text: GO:0071944
description: cell periphery
meaning: GO:0071944
GO:0098794:
text: GO:0098794
description: postsynapse
meaning: GO:0098794
GO:0005938:
text: GO:0005938
description: cell cortex
meaning: GO:0005938
GO:0005615:
text: GO:0005615
description: extracellular space
meaning: GO:0005615
GO:0099513:
text: GO:0099513
description: polymeric cytoskeletal fiber
meaning: GO:0099513
CP:0000043:
text: CP:0000043
meaning: CP:0000043
GO:0042470:
text: GO:0042470
description: melanosome
meaning: GO:0042470
GO:0016021:
text: GO:0016021
description: integral component of membrane
meaning: GO:0016021
GO:0043005:
text: GO:0043005
description: neuron projection
meaning: GO:0043005
GO:0042588:
text: GO:0042588
description: zymogen granule
meaning: GO:0042588
GO:1904115:
text: GO:1904115
description: axon cytoplasm
meaning: GO:1904115
GO:0098588:
text: GO:0098588
description: bounding membrane of organelle
meaning: GO:0098588
GO:0019814:
text: GO:0019814
description: immunoglobulin complex
meaning: GO:0019814
GO:0043227:
text: GO:0043227
description: membrane-bounded organelle
meaning: GO:0043227
GO:0005720:
text: GO:0005720
description: nuclear heterochromatin
meaning: GO:0005720
GO:0005773:
text: GO:0005773
description: vacuole
meaning: GO:0005773
GO:0030141:
text: GO:0030141
description: secretory granule
meaning: GO:0030141
GO:0098871:
text: GO:0098871
description: postsynaptic actin cytoskeleton
meaning: GO:0098871
GO:0030016:
text: GO:0030016
description: myofibril
meaning: GO:0030016
GO:0070820:
text: GO:0070820
description: tertiary granule
meaning: GO:0070820
GO:0005887:
text: GO:0005887
description: integral component of plasma membrane
meaning: GO:0005887
GO:0030123:
text: GO:0030123
description: AP-3 adaptor complex
meaning: GO:0030123
GO:0098895:
text: GO:0098895
description: postsynaptic endosome membrane
meaning: GO:0098895
GO:0070464:
text: GO:0070464
description: alphav-beta3 integrin-collagen alpha3(VI) complex
meaning: GO:0070464
GO:0070069:
text: GO:0070069
description: cytochrome complex
meaning: GO:0070069
GO:1990635:
text: GO:1990635
description: proximal dendrite
meaning: GO:1990635
GO:0005889:
text: GO:0005889
description: potassium:proton exchanging ATPase complex
meaning: GO:0005889
GO:0032921:
text: GO:0032921
description: sarcosine oxidase complex
meaning: GO:0032921
GO:0035102:
text: GO:0035102
description: PRC1 complex
meaning: GO:0035102
GO:0030915:
text: GO:0030915
description: Smc5-Smc6 complex
meaning: GO:0030915
GO:1990615:
text: GO:1990615
description: Kelch-containing formin regulatory complex
meaning: GO:1990615
GO:0030095:
text: GO:0030095
description: chloroplast photosystem II
meaning: GO:0030095
GO:0097135:
text: GO:0097135
description: cyclin E2-CDK2 complex
meaning: GO:0097135
GO:0070467:
text: GO:0070467
description: RC-1 DNA recombination complex
meaning: GO:0070467
GO:0005797:
text: GO:0005797
description: Golgi medial cisterna
meaning: GO:0005797
GO:0001917:
text: GO:0001917
description: photoreceptor inner segment
meaning: GO:0001917
GO:1990851:
text: GO:1990851
description: Wnt-Frizzled-LRP5/6 complex
meaning: GO:1990851
GO:1990811:
text: GO:1990811
description: MWP complex
meaning: GO:1990811
GO:0009923:
text: GO:0009923
description: fatty acid elongase complex
meaning: GO:0009923
GO:0061701:
text: GO:0061701
description: bacterial outer membrane vesicle
meaning: GO:0061701
GO:0060109:
text: GO:0060109
description: medial layer of collagen and cuticulin-based cuticle extracellular
matrix
meaning: GO:0060109
GO:0070031:
text: GO:0070031
description: alphav-beta5 integrin-osteopontin complex
meaning: GO:0070031
GO:0071022:
text: GO:0071022
description: U12-type post-spliceosomal complex
meaning: GO:0071022
GO:0000139:
text: GO:0000139
description: Golgi membrane
meaning: GO:0000139
GO:0045264:
text: GO:0045264
description: plasma membrane proton-transporting ATP synthase complex, coupling
factor F(o)
meaning: GO:0045264
GO:1990906:
text: GO:1990906
description: accessory outer segment
meaning: GO:1990906
GO:0035996:
text: GO:0035996
description: rhabdomere microvillus
meaning: GO:0035996
GO:0031201:
text: GO:0031201
description: SNARE complex
meaning: GO:0031201
GO:0046798:
text: GO:0046798
description: viral portal complex
meaning: GO:0046798
GO:0098803:
text: GO:0098803
description: respiratory chain complex
meaning: GO:0098803
GO:0001674:
text: GO:0001674
description: female germ cell nucleus
meaning: GO:0001674
GO:0048500:
text: GO:0048500
description: signal recognition particle
meaning: GO:0048500
GO:0030880:
text: GO:0030880
description: RNA polymerase complex
meaning: GO:0030880
GO:0039626:
text: GO:0039626
description: viral intermediate capsid
meaning: GO:0039626
GO:0031097:
text: GO:0031097
description: medial cortex
meaning: GO:0031097
GO:0036064:
text: GO:0036064
description: ciliary basal body
meaning: GO:0036064
GO:1902636:
text: GO:1902636
description: kinociliary basal body
meaning: GO:1902636
GO:0032040:
text: GO:0032040
description: small-subunit processome
meaning: GO:0032040
GO:0090637:
text: GO:0090637
description: inner dense plaque of desmosome
meaning: GO:0090637
GO:0070767:
text: GO:0070767
description: BRCA1-Rad51 complex
meaning: GO:0070767
GO:0150005:
text: GO:0150005
description: enzyme activator complex
meaning: GO:0150005
GO:0031411:
text: GO:0031411
description: gas vesicle
meaning: GO:0031411
GO:0071120:
text: GO:0071120
description: alpha4-beta1 integrin-CD47 complex
meaning: GO:0071120
GO:0031965:
text: GO:0031965
description: nuclear membrane
meaning: GO:0031965
GO:0098888:
text: GO:0098888
description: extrinsic component of presynaptic membrane
meaning: GO:0098888
GO:0090641:
text: GO:0090641
description: microsporidian-type endospore
meaning: GO:0090641
GO:1990340:
text: GO:1990340
description: laminin-15 complex
meaning: GO:1990340
GO:0034361:
text: GO:0034361
description: very-low-density lipoprotein particle
meaning: GO:0034361
GO:0044172:
text: GO:0044172
description: host cell endoplasmic reticulum-Golgi intermediate compartment
meaning: GO:0044172
GO:0097619:
text: GO:0097619
description: PTEX complex
meaning: GO:0097619
GO:1990812:
text: GO:1990812
description: growth cone filopodium
meaning: GO:1990812
GO:0039658:
text: GO:0039658
description: TBK1-IKKE-DDX3 complex
meaning: GO:0039658
GO:0000344:
text: GO:0000344
description: plastid-encoded plastid RNA polymerase complex B
meaning: GO:0000344
GO:1904930:
text: GO:1904930
description: amphisome membrane
meaning: GO:1904930
GO:0098559:
text: GO:0098559
description: cytoplasmic side of early endosome membrane
meaning: GO:0098559
GO:0098860:
text: GO:0098860
description: actin filament bundle of stereocilium
meaning: GO:0098860
GO:1903269:
text: GO:1903269
description: ornithine carbamoyltransferase inhibitor complex
meaning: GO:1903269
GO:0099079:
text: GO:0099079
description: actin body
meaning: GO:0099079
GO:0098774:
text: GO:0098774
description: curli
meaning: GO:0098774
GO:0110146:
text: GO:0110146
description: magnetosome membrane
meaning: GO:0110146
GO:0002945:
text: GO:0002945
description: cyclin K-CDK13 complex
meaning: GO:0002945
GO:0120044:
text: GO:0120044
description: stereocilium base
meaning: GO:0120044
GO:0034675:
text: GO:0034675
description: integrin alpha6-beta1 complex
meaning: GO:0034675
GO:1990909:
text: GO:1990909
description: Wnt signalosome
meaning: GO:1990909
GO:1990433:
text: GO:1990433
description: CSL-Notch-Mastermind transcription factor complex
meaning: GO:1990433
GO:0090536:
text: GO:0090536
description: NoRC complex
meaning: GO:0090536
GO:0039713:
text: GO:0039713
description: viral factory
meaning: GO:0039713
GO:0070826:
text: GO:0070826
description: paraferritin complex
meaning: GO:0070826
GO:1990463:
text: GO:1990463
description: lateral cortical node
meaning: GO:1990463
GO:0071197:
text: GO:0071197
description: Kv4.2-Kv4.3 channel complex
meaning: GO:0071197
GO:0070117:
text: GO:0070117
description: organellar chromatophore thylakoid lumen
meaning: GO:0070117
GO:0016939:
text: GO:0016939
description: kinesin II complex
meaning: GO:0016939
GO:0090570:
text: GO:0090570
description: RNA polymerase I transcription repressor complex
meaning: GO:0090570
GO:0032176:
text: GO:0032176
description: split septin rings
meaning: GO:0032176
GO:0032993:
text: GO:0032993
description: protein-DNA complex
meaning: GO:0032993
GO:0030485:
text: GO:0030485
description: smooth muscle contractile fiber
meaning: GO:0030485
GO:0036021:
text: GO:0036021
description: endolysosome lumen
meaning: GO:0036021
GO:0031251:
text: GO:0031251
description: PAN complex
meaning: GO:0031251
GO:0098568:
text: GO:0098568
description: external side of mycolate outer membrane
meaning: GO:0098568
GO:0045298:
text: GO:0045298
description: tubulin complex
meaning: GO:0045298
GO:0098022:
text: GO:0098022
description: viral capsid, fiber
meaning: GO:0098022
GO:0071563:
text: GO:0071563
description: Myo2p-Vac17p-Vac8p transport complex
meaning: GO:0071563
GO:0032865:
text: GO:0032865
description: ERMES complex
meaning: GO:0032865
GO:0045293:
text: GO:0045293
description: mRNA editing complex
meaning: GO:0045293
GO:0005584:
text: GO:0005584
description: collagen type I trimer
meaning: GO:0005584
GO:0042022:
text: GO:0042022
description: interleukin-12 receptor complex
meaning: GO:0042022
GO:0071121:
text: GO:0071121
description: alpha9-beta1 integrin-VEGF-D complex
meaning: GO:0071121
GO:0035842:
text: GO:0035842
description: old cell tip after activation of bipolar cell growth
meaning: GO:0035842
GO:0016028:
text: GO:0016028
description: rhabdomere
meaning: GO:0016028
GO:0044223:
text: GO:0044223
description: pirellulosome
meaning: GO:0044223
GO:0005666:
text: GO:0005666
description: RNA polymerase III complex
meaning: GO:0005666
GO:0150058:
text: GO:0150058
description: amylin receptor complex 3
meaning: GO:0150058
GO:0101003:
text: GO:0101003
description: ficolin-1-rich granule membrane
meaning: GO:0101003
GO:0030015:
text: GO:0030015
description: CCR4-NOT core complex
meaning: GO:0030015
GO:0070385:
text: GO:0070385
description: egasyn-beta-glucuronidase complex
meaning: GO:0070385
GO:0101004:
text: GO:0101004
description: cytolytic granule membrane
meaning: GO:0101004
GO:0060104:
text: GO:0060104
description: surface coat of collagen and cuticulin-based cuticle extracellular
matrix
meaning: GO:0060104
GO:0002142:
text: GO:0002142
description: stereocilia ankle link complex
meaning: GO:0002142
GO:0016938:
text: GO:0016938
description: kinesin I complex
meaning: GO:0016938
GO:0019823:
text: GO:0019823
description: P5 peroxisome
meaning: GO:0019823
GO:0120202:
text: GO:0120202
description: rod photoreceptor disc membrane
meaning: GO:0120202
GO:0044201:
text: GO:0044201
description: host cell nuclear inner membrane
meaning: GO:0044201
GO:0098538:
text: GO:0098538
description: lumenal side of transport vesicle membrane
meaning: GO:0098538
GO:1990565:
text: GO:1990565
description: HSP90-CDC37 chaperone complex
meaning: GO:1990565
GO:0099071:
text: GO:0099071
description: dynamic microtubule bundle
meaning: GO:0099071
GO:0033098:
text: GO:0033098
description: amyloplast inner membrane
meaning: GO:0033098
GO:0033289:
text: GO:0033289
description: intraconoid microtubule
meaning: GO:0033289
GO:0033620:
text: GO:0033620
description: Mei2 nuclear dot complex
meaning: GO:0033620
GO:0033985:
text: GO:0033985
description: acidocalcisome lumen
meaning: GO:0033985
GO:0101002:
text: GO:0101002
description: ficolin-1-rich granule
meaning: GO:0101002
GO:0005875:
text: GO:0005875
description: microtubule associated complex
meaning: GO:0005875
GO:0005705:
text: GO:0005705
description: polytene chromosome interband
meaning: GO:0005705
GO:0002080:
text: GO:0002080
description: acrosomal membrane
meaning: GO:0002080
GO:0035371:
text: GO:0035371
description: microtubule plus-end
meaning: GO:0035371
GO:0032809: