diff --git a/R/visualization_functions.R b/R/visualization_functions.R index 6e1d536..2b6b21e 100644 --- a/R/visualization_functions.R +++ b/R/visualization_functions.R @@ -271,10 +271,10 @@ plot_features <- function(rdr = NULL, range_feature <- as.numeric(user_range) } - boxplot(data[feature_names[i], ] ~ conditions, varwidth = T, frame.plot = F, las = 1, + boxplot(unlist(data[feature_names[i], ]) ~ conditions, varwidth = T, frame.plot = F, las = 1, pch = 19, outline = F, ylim = range_feature, main = feature_names[i], xlab = "", ylab = "Feature value") - stripchart(data[feature_names[i], ] ~ conditions, pch = 19, col = "grey60", add = T, vertical = T, + stripchart(unlist(data[feature_names[i], ]) ~ conditions, pch = 19, col = "grey60", add = T, vertical = T, method = "jitter") grid() }