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brapi-resources.json
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brapi-resources.json
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{
"brapi-providers": {
"category": [
{
"name": "IPK-Gatersleben",
"description": "Leibniz Institute of Plant Genetics and Crop Plant Research",
"logo": "https://www.ipk-gatersleben.de/fileadmin/template/main/images-ipk/ipklogo.png",
"resource": [
{
"name": "IPK Gatersleben - Germplasm and Phenotypic Data",
"base-url": "https://webapps.ipk-gatersleben.de/api/brapi/v1",
"logo": "https://www.ipk-gatersleben.de/fileadmin/template/main/images-ipk/ipklogo.png",
"description": "Germplasm resources and plant phenotyping from IPK-Gatersleben"
}
]
},
{
"name": "James Hutton Institute, The",
"description": "JHI",
"logo": "https://ics.hutton.ac.uk/resources/brapi/logos/jhi-128.png",
"resource": [
{
"name": "Germinate 3 Demo (https://ics)",
"base-url": "https://ics.hutton.ac.uk/germinate-demo/cactuar-devel/brapi/v1/",
"logo": "https://ics.hutton.ac.uk/resources/brapi/logos/germinate-128.png",
"description": "Small demo dataset using a Germinate 3 backend."
}
]
},
{
"name": "Triticeae Toolbox, The",
"description": "The Triticeae Toolbox (T3) is the web portal for data generated by the Triticeae Coordinated Agricultural Project (T-CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). The database, developed initially as The Hordeum Toolbox (THT) to hold barley data generated by the Barley CAP project (2006-2010) is being maintained as T3 Barley while a sister database T3 Wheat will hold data generated for Triticum spp. Both are being enhanced in database performance, community curation and user tools. T3 contains germplasm line information, pedigree, genotype and phenotypic data from breeding programs participating in the CAP and core germplasm collections maintained by the USDA National Small Grains Collection.",
"logo": "https://ics.hutton.ac.uk/resources/brapi/t3-128.png",
"resource": {
"name": "Wheat Data",
"base-url": "https://triticeaetoolbox.org/wheat/brapi/v1",
"certificate": "https://ics.hutton.ac.uk/resources/brapi/certs/triticeaetoolbox.org.crt",
"logo": "https://ics.hutton.ac.uk/resources/brapi/logos/t3-128.png"
}
},
{
"name": "Boyce Thompson Institute",
"description": "Discovery and inovation in the life sciences",
"logo": "https://cassavabase.org/static/img/bti_logo_2016.png",
"resource": [
{
"name": "Cassavabase",
"base-url": "https://cassavabase.org/brapi/v1/",
"logo": "https://cassavabase.org/documents/img/cassava/nextgen_cassava_icon.png",
"description": "The central database for the NextGen Cassava Project."
},
{
"name": "Yambase",
"base-url": "https://yambase.org/brapi/v1/",
"logo": "https://yambase.org/documents/img/AfricaYamLogo.jpg",
"description": "The central database for the Africa Yam Project."
},
{
"name": "Sweetpotatobase",
"base-url": "https://sweetpotatobase.org/brapi/v1/",
"logo": "https://sweetpotatobase.org/documents/img/sweetpotatobase/sweetpotatobase_logo.png",
"description": "The central database for the Genomic Tools for Sweetpotato Improvement Project."
},
{
"name": "Musabase",
"base-url": "https://musabase.org/brapi/v1/",
"logo": "https://musabase.org/static/img/musabase/breeding_better_bananas_logo2.png",
"description": "The central database for the Breeding Better Bananas Project."
},
{
"name": "Solgenomics",
"base-url": "https://solgenomics.net/brapi/v1/",
"logo": "https://solgenomics.net/documents/img/sgn_transparent_logo.png",
"description": "Solanaceae database (tomato, tobacco, eggplant, pepper, potato, petunia)."
}
]
},
{
"name": "MGIS",
"description": "Musa Germplasm Information System",
"logo": "http://www.crop-diversity.org/mgis/sites/crop-diversity.org.mgis/themes/mgis_theme/logo.png",
"resource": {
"name": "Musa Germplasm Information System",
"base-url": "https://www.crop-diversity.org/mgis/brapi/v1/"
}
},
{
"name": "Wageningen Plant Sciences, Plant Breeding BrAPI resources",
"description": "Core BrAPI resources of Wageningen Plant Sciences, deployed by department of Plant Breeding.",
"resource": {
"name": "EU-SOL Tomato collection",
"base-url": "https://www.eu-sol.wur.nl/webapi/tomato/brapi/v1/",
"description": "Collection of approx. 7000 tomato accessions, mainly phenotypic but also partial genotypic information."
}
},
{
"name": "INRA URGI",
"description": "Multi-species plant breeding data from INRA (French National Institute for Agricultural Research)",
"logo": "https://urgi.versailles.inra.fr/var/storage/images/media/images/logos/urgi/3450-2-eng-GB/URGI_small.png",
"resource": {
"name": "URGI GnpIS Information System",
"base-url": "https://urgi.versailles.inra.fr/faidare/brapi/v1/",
"logo": "https://urgi.versailles.inra.fr/var/storage/images/media/images/logos/urgi/3450-2-eng-GB/URGI_small.png",
"description": "See web service documentation at https://urgi.versailles.inra.fr/faidare/swagger-ui.html."
}
},
{
"name": "Bioversity International",
"description": "Bioversity International is a global research-for-development organization.",
"logo": "https://www.bioversityinternational.org/fileadmin/templates/IMG/bioversity-logo.png",
"resource": [
{
"name": "Musa Acuminata GWAS Panel - GBS - genome V1",
"base-url": "https://www.crop-diversity.org/gigwa/rest/Musa_acuminata-v1/brapi/v1/",
"logo": "https://www.bioversityinternational.org/fileadmin/templates/IMG/bioversity-logo.png",
"description": "The GWAS panel is a list of diploid accessions (composed of musa acuminata and AA) carefully selected to support Genome-Wide Association Study (GWAS) in banana in order to quickly and accurately link areas of the genome with important traits."
},
{
"name": "Musa Acuminata GWAS Panel - GBS - genome V2",
"base-url": "https://www.crop-diversity.org/gigwa/rest/Musa_acuminata-v2/brapi/v1/",
"logo": "https://www.bioversityinternational.org/fileadmin/templates/IMG/bioversity-logo.png",
"description": "The GWAS panel is a list of diploid accessions (composed of musa acuminata and AA) carefully selected to support Genome-Wide Association Study (GWAS) in banana in order to quickly and accurately link areas of the genome with important traits."
}
]
},
{
"name": "VIB Center For Plant Systems Biology",
"description": "BrAPI endpoint to access the publicly available data from PIPPA, an interface for plant phenotype analysis",
"logo": "https://www.psb.ugent.be/images/psbgroot.png",
"resource": [
{
"name": "PIPPA - PSB Interface for Plant Phenotype Analysis",
"base-url": "https://pippa.psb.ugent.be/BrAPIPPA/brapi/v1/",
"logo": "https://www.psb.ugent.be/images/psbgroot.png",
"description": "More information about the provided datasets can be found here: https://pippa.psb.ugent.be/"
}
]
},
{
"name": "BrAPI",
"description": "The BrAPI Community",
"logo": "https://brapi.org/assets/images/brapi-logo.svg",
"resource": [
{
"name": "BrAPI Test Server",
"base-url": "https://test-server.brapi.org/brapi/v1/",
"logo": "https://brapi.org/assets/images/brapi-logo.svg",
"description": "BrAPI Official Test Server"
}
]
},
{
"name": "Crop Ontology",
"description": "The Crop Ontology project website.",
"logo": "http://www.cropontology.org/images/Crop_Ontology_logo.png",
"resource": [
{
"name": "Crop Ontology BrAPI implementation",
"base-url": "http://www.cropontology.org/brapi/v1/"
}
]
},
{
"name": "TERRA-REF",
"description": "TERRA Reference phenotyping platform.",
"logo": "https://terraref.org/sites/terraref.org/files/site-logo.png",
"resource": [
{
"name": "TERRA-REF BrAPI implementation",
"base-url": "https://brapi.workbench.terraref.org/brapi/v1/"
}
]
},
{
"name": "ITPGRFA",
"description": "International Treaty on Plant Genetic Resources for Food and Agriculture",
"logo": "http://www.fao.org/uploads/pics/logo_en.jpg",
"resource": [
{
"name": "GLIS Germplasm DOI Repository",
"base-url": "https://ssl.fao.org/glisapi/v1"
}
]
}
]
}
}