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Ensure that start position does not exceed end position for a transcript segment #366

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jarbesfeld opened this issue Sep 5, 2024 · 0 comments
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bug Something isn't working priority:medium Medium priority

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@jarbesfeld
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Describe the bug

Currently, a user can generate an transcript segment where the start position is greater than the end position. This should not be allowed, as start <= end.

Steps to reproduce

Supplying a value to genomic_to_tx_segment where seg_start_genomic is greater than seg_end_genomic

Expected behavior

A warning statement should appear saying: "The starting genomic position for the segment must be less than or equal to the end genomic position for the segment"

Current behavior

A warning statement does not appear

Possible reason(s)

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Suggested fix

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Branch, commit, and/or version

Main branch

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Environment details

Mac M1

Additional details

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Contribution

None

@jarbesfeld jarbesfeld added bug Something isn't working priority:medium Medium priority labels Sep 5, 2024
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